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Cluster: Rep_499_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_499_c_20 Rep_499_c_20_6 10856 12070 - GT2
pfam Rep_499_c_20 Rep_499_c_20_7 12130 13623 - Polysacc_deac_3
pfam Rep_499_c_20 Rep_499_c_20_8 13625 14401 - MetW | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme Rep_499_c_20 Rep_499_c_20_9 14429 15286 - GT2
CAZyme Rep_499_c_20 Rep_499_c_20_10 15321 16469 - GT4
CAZyme Rep_499_c_20 Rep_499_c_20_11 16512 17633 - GT4
TC Rep_499_c_20 Rep_499_c_20_12 17661 19127 - 2.A.66.2.23
CAZyme Rep_499_c_20 Rep_499_c_20_13 19120 20235 - GT94
Gene ID: Rep_499_c_20_6
Type: CAZyme
Location: 10856 - 12070 (-)
Gene ID: Rep_499_c_20_7
Type: pfam
Location: 12130 - 13623 (-)
Gene ID: Rep_499_c_20_8
Type: pfam
Location: 13625 - 14401 (-)
Gene ID: Rep_499_c_20_9
Type: CAZyme
Location: 14429 - 15286 (-)
Gene ID: Rep_499_c_20_10
Type: CAZyme
Location: 15321 - 16469 (-)
Gene ID: Rep_499_c_20_11
Type: CAZyme
Location: 16512 - 17633 (-)
Gene ID: Rep_499_c_20_12
Type: TC
Location: 17661 - 19127 (-)
Gene ID: Rep_499_c_20_13
Type: CAZyme
Location: 19120 - 20235 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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