Cluster: Rep_499_CGC13
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_499
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_499_c_16 | Rep_499_c_16_8 | 13919 | 16018 | + | GH36 | GH36 |
| CAZyme | Rep_499_c_16 | Rep_499_c_16_9 | 16088 | 18211 | + | GH31_14 |
| NULL(UNKNOWN) | Rep_499_c_16 | Rep_499_c_16_10 | 18274 | 20091 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_499_c_16 | Rep_499_c_16_11 | 20314 | 23457 | - | GH36 | GH43_24 |
| sulfatase | Rep_499_c_16 | Rep_499_c_16_12 | 23480 | 25075 | - | S1_15 |
| CAZyme | Rep_499_c_16 | Rep_499_c_16_13 | 25099 | 27462 | - | CBM32 |
| sulfatase | Rep_499_c_16 | Rep_499_c_16_14 | 27474 | 28871 | - | S1_20 |
| TF | Rep_499_c_16 | Rep_499_c_16_15 | 29091 | 33092 | + | 0035607 |
| TC | Rep_499_c_16 | Rep_499_c_16_16 | 33124 | 36441 | + | 1.B.14.6.1 |
| pfam | Rep_499_c_16 | Rep_499_c_16_17 | 36450 | 38366 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_499_c_16 | Rep_499_c_16_18 | 38490 | 39893 | + | GH109 |
| pfam | Rep_499_c_16 | Rep_499_c_16_19 | 40458 | 41327 | - | Exo_endo_phos |
| TF | Rep_499_c_16 | Rep_499_c_16_20 | 41352 | 45332 | - | HTH_AraC |
| CAZyme | Rep_499_c_16 | Rep_499_c_16_21 | 45489 | 46535 | + | GH130_4 |
| TC | Rep_499_c_16 | Rep_499_c_16_22 | 46554 | 47801 | + | 2.A.1.33.2 |
| CAZyme | Rep_499_c_16 | Rep_499_c_16_23 | 47969 | 49129 | + | GH130_3 |
| TC | Rep_499_c_16 | Rep_499_c_16_24 | 49138 | 52305 | + | 1.B.14.6.1 |
Gene ID: Rep_499_c_16_8
Type: CAZyme
Location: 13919 - 16018 (+)
Type: CAZyme
Location: 13919 - 16018 (+)
Gene ID: Rep_499_c_16_9
Type: CAZyme
Location: 16088 - 18211 (+)
Type: CAZyme
Location: 16088 - 18211 (+)
Gene ID: Rep_499_c_16_10
Type:
Location: 18274 - 20091 (+)
Type:
Location: 18274 - 20091 (+)
Gene ID: Rep_499_c_16_11
Type: CAZyme
Location: 20314 - 23457 (-)
Type: CAZyme
Location: 20314 - 23457 (-)
Gene ID: Rep_499_c_16_12
Type: sulfatase
Location: 23480 - 25075 (-)
Type: sulfatase
Location: 23480 - 25075 (-)
Gene ID: Rep_499_c_16_13
Type: CAZyme
Location: 25099 - 27462 (-)
Type: CAZyme
Location: 25099 - 27462 (-)
Gene ID: Rep_499_c_16_14
Type: sulfatase
Location: 27474 - 28871 (-)
Type: sulfatase
Location: 27474 - 28871 (-)
Gene ID: Rep_499_c_16_15
Type: TF
Location: 29091 - 33092 (+)
Type: TF
Location: 29091 - 33092 (+)
Gene ID: Rep_499_c_16_16
Type: TC
Location: 33124 - 36441 (+)
Type: TC
Location: 33124 - 36441 (+)
Gene ID: Rep_499_c_16_17
Type: pfam
Location: 36450 - 38366 (+)
Type: pfam
Location: 36450 - 38366 (+)
Gene ID: Rep_499_c_16_18
Type: CAZyme
Location: 38490 - 39893 (+)
Type: CAZyme
Location: 38490 - 39893 (+)
Gene ID: Rep_499_c_16_19
Type: pfam
Location: 40458 - 41327 (-)
Type: pfam
Location: 40458 - 41327 (-)
Gene ID: Rep_499_c_16_20
Type: TF
Location: 41352 - 45332 (-)
Type: TF
Location: 41352 - 45332 (-)
Gene ID: Rep_499_c_16_21
Type: CAZyme
Location: 45489 - 46535 (+)
Type: CAZyme
Location: 45489 - 46535 (+)
Gene ID: Rep_499_c_16_22
Type: TC
Location: 46554 - 47801 (+)
Type: TC
Location: 46554 - 47801 (+)
Gene ID: Rep_499_c_16_23
Type: CAZyme
Location: 47969 - 49129 (+)
Type: CAZyme
Location: 47969 - 49129 (+)
Gene ID: Rep_499_c_16_24
Type: TC
Location: 49138 - 52305 (+)
Type: TC
Location: 49138 - 52305 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902491285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.