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Cluster: Rep_499_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_499_c_29 Rep_499_c_29_1 3 497 - GH3
NULL(UNKNOWN) Rep_499_c_29 Rep_499_c_29_2 699 2339 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_499_c_29 Rep_499_c_29_3 2408 4291 - GH127
CAZyme Rep_499_c_29 Rep_499_c_29_4 4624 7047 - GH31_15
NULL(UNKNOWN) Rep_499_c_29 Rep_499_c_29_5 7080 7202 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_499_c_29 Rep_499_c_29_6 7177 8607 - GH28
pfam Rep_499_c_29 Rep_499_c_29_7 8708 10552 - SusD_RagB | SusD-like_3
TC Rep_499_c_29 Rep_499_c_29_8 10573 13938 - 1.B.14.6.1
Gene ID: Rep_499_c_29_1
Type: CAZyme
Location: 3 - 497 (-)
Gene ID: Rep_499_c_29_2
Type:
Location: 699 - 2339 (-)
Gene ID: Rep_499_c_29_3
Type: CAZyme
Location: 2408 - 4291 (-)
Gene ID: Rep_499_c_29_4
Type: CAZyme
Location: 4624 - 7047 (-)
Gene ID: Rep_499_c_29_5
Type:
Location: 7080 - 7202 (-)
Gene ID: Rep_499_c_29_6
Type: CAZyme
Location: 7177 - 8607 (-)
Gene ID: Rep_499_c_29_7
Type: pfam
Location: 8708 - 10552 (-)
Gene ID: Rep_499_c_29_8
Type: TC
Location: 10573 - 13938 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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