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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna22192.1-v1.0-hybrid |
Family | GH3 |
Protein Properties | Length: 568 Molecular Weight: 61828.7 Isoelectric Point: 8.19 |
Chromosome | Chromosome/Scaffold: 4 Start: 24281264 End: 24284534 |
Description | Glycosyl hydrolase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 80 | 279 | 0 |
VDPELVKKIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTQIIPGLQGDMPPNSRKGVPFVAPGNKKVAACAKHYVGDGGTTKG INENNTVIDRHGFLSIHMPAYYNSIIEGVATIMVSYSSWNGVKMHANRDMVTGFLKNTLRFRGFVISDWEGIDRITSPPHANYSYSITAGINAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 568 Download |
METSEGYEAD VRTRLKVRTS VCSPPSGAGD GAPPPQKTLA ASPTTFPPRR VHSFREGKWS 60 GTLLESSGME ARRRLYILSV DPELVKKIGA ATALEVRATG IPYVFAPCIA VCRDPRWGRC 120 YESYSEDHKI VQAMTQIIPG LQGDMPPNSR KGVPFVAPGN KKVAACAKHY VGDGGTTKGI 180 NENNTVIDRH GFLSIHMPAY YNSIIEGVAT IMVSYSSWNG VKMHANRDMV TGFLKNTLRF 240 RGFVISDWEG IDRITSPPHA NYSYSITAGI NAGIDMIMVP NNYTEFIDGL TFQVKNKIIP 300 MSRIDDAVRR ILRVKFTMGL FENRLADLSL VNQLGSQEHR DLAREAVRRS LVLLTNGESA 360 DEPLLPLPKK TSKILVAGSH ADNLGYQCGG WTIEWQGMSG NNLTHGTTIL TGIKNTVDPE 420 TKVVYKENPD AEYVKSNGFS YAIVVVGEPP YAETFGDSLN LTLPDAGLKT ITNVCGAVKC 480 VVVVVSGRPV VMQPYVSLLD ALVAAWLPGS EGQGVADVLF GDYGFTGKLS RTWFKTVDQL 540 PMNVGDPHYD PLFPFGFGLT TAPTKAN* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-28 | 88 | 543 | 499 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-43 | 351 | 560 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-53 | 79 | 560 | 551 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-65 | 81 | 422 | 348 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-70 | 81 | 314 | 236 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 81 | 565 | 120 | 603 | A Chain A, Structure Of The Chitinase From Jack Bean |
PDB | 1iex_A | 0 | 81 | 565 | 120 | 603 | A Chain A, Structure Of The Chitinase From Jack Bean |
PDB | 1iew_A | 0 | 81 | 565 | 120 | 603 | A Chain A, Structure Of The Chitinase From Jack Bean |
PDB | 1iev_A | 0 | 81 | 565 | 120 | 603 | A Chain A, Structure Of The Chitinase From Jack Bean |
PDB | 1ieq_A | 0 | 81 | 565 | 120 | 603 | A Chain A, Structure Of The Chitinase From Jack Bean |
Sequence Alignments (This image is cropped. Click for full image.) |
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