y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10010212m |
Family | GH3 |
Protein Properties | Length: 614 Molecular Weight: 66276.5 Isoelectric Point: 5.0478 |
Chromosome | Chromosome/Scaffold: 16 Start: 4779552 End: 4782907 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 87 | 322 | 0 |
LASRLGIPIIYGTDAVHGNNNVYGATVFPHNIGLGATRDADLVRRIGAATALEVRASGVHWAFAPCVAVLRDPRWGRSYESYGEDAGLVCEMTSLVSGLQ GVPPEEHPNGYPFVAGRNNVVACAKHFVGDGGTDKGINEGNTITSYEDLEKIHIPPYLNCLAQGVSTVMASYSSWNGSRLHADYFLLTEVLKEKLGFKGF VISDWEGLDRLSEPQGSNYRNCIKLAVNAGVDMVMV |
Full Sequence |
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Protein Sequence Length: 614 Download |
MVGKESSCVY KNPDAPVEAR VQDLLSHMTL PEKIGQMTQI ERTVASPAAI TDFFIGSVLN 60 AGGSVPFEDA KSSDWADMID GFQRSALASR LGIPIIYGTD AVHGNNNVYG ATVFPHNIGL 120 GATRDADLVR RIGAATALEV RASGVHWAFA PCVAVLRDPR WGRSYESYGE DAGLVCEMTS 180 LVSGLQGVPP EEHPNGYPFV AGRNNVVACA KHFVGDGGTD KGINEGNTIT SYEDLEKIHI 240 PPYLNCLAQG VSTVMASYSS WNGSRLHADY FLLTEVLKEK LGFKGFVISD WEGLDRLSEP 300 QGSNYRNCIK LAVNAGVDMV MVPFKYEKFI QDMTSLVESG EILMARVNDA VERILRVKFV 360 AGLFEHPLTD RSLLGTVGCE KHREVAREAV RKSLVLLKKG ENADKPFLPL DRNAKRILVT 420 GPHADDLGYQ CGGWTKTWFG LSGKITIGTT LLDAIKAAVG DKTEVIYEKT PSKETLASSE 480 GFSYAIVAVG ESPYAETIGD SSELIIPFNG SDIVTTVAER IPTLVILISG RPVVLEPAVL 540 EKTEALVAAW LPGTEGQGMA DVIFGDYDFE GKLPVSWFKT VEHLPLNAHA NSYDPLFPLG 600 FGLNSKTGVT SPV* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 6.0e-49 | 12 | 593 | 633 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-49 | 394 | 604 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-84 | 29 | 357 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-84 | 12 | 613 | 677 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-87 | 28 | 435 | 415 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25449.1 | 0 | 28 | 608 | 1 | 581 | At3g47010 [Arabidopsis thaliana] |
RefSeq | NP_190284.1 | 0 | 1 | 606 | 1 | 606 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_190285.3 | 0 | 4 | 608 | 5 | 609 | hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_190288.1 | 0 | 1 | 604 | 1 | 629 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | NP_190289.1 | 0 | 1 | 607 | 1 | 605 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 9 | 606 | 4 | 600 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 1x38_A | 0 | 9 | 606 | 4 | 600 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 1lq2_A | 0 | 9 | 606 | 4 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 9 | 605 | 4 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 9 | 605 | 4 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 328 | 136 | 463 | 0 |
EX132989 | 299 | 56 | 354 | 0 |
ES905148 | 278 | 1 | 278 | 0 |
DK471066 | 274 | 1 | 274 | 0 |
HO784016 | 426 | 56 | 480 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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