y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G260700.3 |
Family | GH3 |
Protein Properties | Length: 535 Molecular Weight: 58772.9 Isoelectric Point: 4.8597 |
Chromosome | Chromosome/Scaffold: 13 Start: 57529088 End: 57533470 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 10 | 245 | 0 |
LESRLGIPLIYGIDAVHGNNSVYGATIFPHNVGLGATRDADLAQRIGAATALEVRATGIHYDFAPCVAVCRDPRWGRCFECYSEDTNIVRKMTSIITGLQ GKPPADYPKGYPFVAGRNNVIACAKHFVGDGGTEKGINEGNTILSYDDLESIHMAPYLDCISQGVSTIMASYSSWNGRQLHADHFLLTEILKDKLGFKGF VISDWEALDRLTEPRGSNYCYCISTAVNAGVDMVMV |
Full Sequence |
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Protein Sequence Length: 535 Download |
MVDKFQQAAL ESRLGIPLIY GIDAVHGNNS VYGATIFPHN VGLGATRDAD LAQRIGAATA 60 LEVRATGIHY DFAPCVAVCR DPRWGRCFEC YSEDTNIVRK MTSIITGLQG KPPADYPKGY 120 PFVAGRNNVI ACAKHFVGDG GTEKGINEGN TILSYDDLES IHMAPYLDCI SQGVSTIMAS 180 YSSWNGRQLH ADHFLLTEIL KDKLGFKGFV ISDWEALDRL TEPRGSNYCY CISTAVNAGV 240 DMVMVPLRYK QFMDDLTFLV ESGEVLMSRI DDAVERILRV KFVAGLFEYP FSDRSLLDIV 300 GCKLHRELAR EAVRKSLVLL KNGKNPENPF LPLDRTAKRI LVAGSHADNL GYQCGGWTST 360 WFGGSGRITI GTTILDAIRE SAGDETEVIY DEYPSTNTLA GQYSFAIVVV GEPPYAETLG 420 DNKELVIPFN GSDIISSVAD KIPTLAILIS GRPLVLEPQV LEKVDAFIAA WLPGTEGRGV 480 TDVVFGDFEF EGRLPMTWFR SNDQLPMNPG QNSYDPLFPL GFGLTYNKEK KPQE* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-37 | 3 | 528 | 594 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-44 | 317 | 526 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-77 | 7 | 526 | 588 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 7.0e-84 | 6 | 280 | 279 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 1.0e-84 | 5 | 349 | 352 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 1 | 529 | 104 | 635 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 1 | 529 | 51 | 582 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 1 | 529 | 185 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 1 | 525 | 70 | 595 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 1 | 529 | 74 | 603 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 531 | 73 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1iex_A | 0 | 1 | 531 | 73 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1iew_A | 0 | 1 | 531 | 73 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1iev_A | 0 | 1 | 531 | 73 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1ieq_A | 0 | 1 | 531 | 73 | 604 | A Chain A, Arabidopsis Thaliana Peroxidase N |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 348 | 59 | 403 | 0 |
FC882555 | 290 | 59 | 348 | 0 |
EL452836 | 304 | 37 | 340 | 0 |
EL455042 | 299 | 1 | 299 | 0 |
CO080620 | 232 | 36 | 267 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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