y
Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.B02287.1 |
Family | GH3 |
Protein Properties | Length: 618 Molecular Weight: 66862 Isoelectric Point: 5.382 |
Chromosome | Chromosome/Scaffold: 2 Start: 44010184 End: 44015823 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 96 | 331 | 0 |
LESRLGIPLIYGIDAVHGNNNIYGATIFPHNIGLGATRDGELVRRIGVATALEVRASGIPYTFAPCVAVLKDPRWGRSYESYSEDTDIVKKMTAIVTGLQ GQPPQGHPKGYPFVAGRNNVIACAKHFVGDGGTERGVNEGNTVTSYEDLERIHMAPYLDCISQGVCTVMASYSSWNGGRLHTNYFLLTEVLKNKLGFKGY VISDWEGLDRLSQPHGSNYRQSISLAVNAGIDMIMV |
Full Sequence |
---|
Protein Sequence Length: 618 Download |
MGSAEDERCV YKDPNAAIED RVNDLLSRMT LQEKVGQMTQ IERRVATPSV LSGLSIGSVL 60 SGGGSGPLGV TESASSEQAL LSDWTDMVDG FQKAALESRL GIPLIYGIDA VHGNNNIYGA 120 TIFPHNIGLG ATRDGELVRR IGVATALEVR ASGIPYTFAP CVAVLKDPRW GRSYESYSED 180 TDIVKKMTAI VTGLQGQPPQ GHPKGYPFVA GRNNVIACAK HFVGDGGTER GVNEGNTVTS 240 YEDLERIHMA PYLDCISQGV CTVMASYSSW NGGRLHTNYF LLTEVLKNKL GFKGYVISDW 300 EGLDRLSQPH GSNYRQSISL AVNAGIDMIM VPFRHEQFAE DLIALAESGE VPISRIDDAV 360 QRILRVKFVS GLFEHPFSDR SLLQIVGCKS HRELAREAVR KSLVLLKNGK EPMKPFLPLD 420 KNAKKILVAG SHADDLGYQC GGWTVAWHGS SGRITIGTTI LDAIKEAVGG NTEVIYEQNP 480 SPSTLASHDY TFAIVAVGEG PYAETLGDNA ELAIPFNGTD VIKSVAERIP TLVLVVSGRP 540 LVIEPHVLEK IDALVAAWLP GSEGTGITDV VFGDYDFEGQ LPVSWFRTVE QLPMDHKANS 600 YDPLFPLGFG LKCKKEA* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-36 | 94 | 601 | 563 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-50 | 403 | 611 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 1.0e-82 | 30 | 366 | 341 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-85 | 14 | 611 | 671 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-87 | 92 | 468 | 385 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 9 | 616 | 3 | 635 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 29 | 616 | 1 | 582 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 5 | 616 | 111 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 5 | 614 | 2 | 597 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 9 | 611 | 4 | 598 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 7 | 611 | 1 | 597 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 1iex_A | 0 | 7 | 611 | 1 | 597 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 1iew_A | 0 | 7 | 611 | 1 | 597 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 1iev_A | 0 | 7 | 611 | 1 | 597 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 1ieq_A | 0 | 7 | 611 | 1 | 597 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DY265467 | 368 | 145 | 507 | 0 |
FC882555 | 290 | 145 | 434 | 0 |
HO784016 | 420 | 73 | 491 | 0 |
GO800387 | 338 | 182 | 518 | 0 |
HO784016 | 38 | 11 | 48 | 0.000006 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|