y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_103.88 |
Family | GH3 |
Protein Properties | Length: 524 Molecular Weight: 57509.6 Isoelectric Point: 7.1007 |
Chromosome | Chromosome/Scaffold: 103 Start: 666055 End: 668202 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 108 | 342 | 0 |
SSRLGIPMIYGIDAVHGNNNVYKATLFPHNIGLGATRDPELVKRIGAATAREVRGTGINYAFAPCIAVCRDPRWGRCYESYSEDPKVVKAMTEIIPGLQG DIPADSRKGVPYVGGQDKVVACAKHFVGDGGTTRGIDENNTVVDWQGLMSIHMPAYYDSIIKGVSTVMVSYSSWNGKKMHANHDLVTNLLKNTLKFRGFV ISDWQGIDRITYPDHANYSYSVMQGLHAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 524 Download |
MRMSMFLLGL LLLIGSAMAE ARPYEDHMSY KDPNQPVNRR IRDLMSRMTL AEKIGQMVQI 60 DRSVATPEIM KNYSIGSLLS GGGSVPRPQA TPQEWINMVN SFQNGSLSSR LGIPMIYGID 120 AVHGNNNVYK ATLFPHNIGL GATRDPELVK RIGAATAREV RGTGINYAFA PCIAVCRDPR 180 WGRCYESYSE DPKVVKAMTE IIPGLQGDIP ADSRKGVPYV GGQDKVVACA KHFVGDGGTT 240 RGIDENNTVV DWQGLMSIHM PAYYDSIIKG VSTVMVSYSS WNGKKMHANH DLVTNLLKNT 300 LKFRGFVISD WQGIDRITYP DHANYSYSVM QGLHAGIDMV MVPFNYTEFI DTVTKLVDDK 360 VIPMSRIDDA VSRILRVKFT MGLFEKPLAD ETYVDQIGSQ AHRDLAREAV RKSLVLLKNG 420 NNADEPVLPL PKNASRILVA GTHANNLGNQ CGGWTITWQG LNGNNFTAGT TILNGIAAAV 480 EPSTEIMFSE NPNADFVKSN NFSYAIVVIG EQPYAEMNGD NTT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-12 | 414 | 513 | 108 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 5.0e-34 | 21 | 484 | 491 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 2.0e-62 | 33 | 517 | 509 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-88 | 48 | 482 | 445 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-89 | 49 | 377 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63654.1 | 0 | 25 | 521 | 3 | 499 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266589.1 | 0 | 2 | 521 | 3 | 519 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 2 | 521 | 3 | 519 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002271545.1 | 0 | 30 | 522 | 27 | 519 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002523937.1 | 0 | 2 | 520 | 3 | 515 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 26 | 521 | 1 | 496 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1x38_A | 0 | 26 | 521 | 1 | 496 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1lq2_A | 0 | 26 | 521 | 1 | 496 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 26 | 521 | 1 | 496 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 26 | 521 | 1 | 496 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 419 | 85 | 503 | 0 |
FN998758 | 316 | 85 | 400 | 0 |
FN998735 | 305 | 85 | 389 | 0 |
FN998511 | 305 | 85 | 389 | 0 |
HO784016 | 47 | 27 | 73 | 0.000000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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