y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G260000.1 |
Family | GH3 |
Protein Properties | Length: 645 Molecular Weight: 70883.1 Isoelectric Point: 6.1091 |
Chromosome | Chromosome/Scaffold: 07 Start: 42692855 End: 42696845 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 108 | 342 | 0 |
STRLGIPMIYGIDSVHGNNNVYKATIFPHNIGLGASRDPELVKKIGAATALETRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPQIVQDMTDIIPGLQG DIPTDSPKGVPFVAGKNNVVACSKHYVGDGGTTKGIDENNTVIDWQGLLSIHMPAYYTSIMKGVSTVMISYSSWNEIKMHTNRELITGFLKNTLGFKGFV ISDWEGLDRITYPPHANYSYSIQAGIHAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 645 Download |
MARSRVPILI MGVVLWCCLT TPAKAEYMKY KDPKQPIPVR IQDLLDRMTL EEKIGQMVQI 60 EREVASAEVM KEYFIGSVLS GGGSVPAPQA SAETWINMVN DFQRGSLSTR LGIPMIYGID 120 SVHGNNNVYK ATIFPHNIGL GASRDPELVK KIGAATALET RATGIPYAFA PCIAVCRDPR 180 WGRCYESYSE DPQIVQDMTD IIPGLQGDIP TDSPKGVPFV AGKNNVVACS KHYVGDGGTT 240 KGIDENNTVI DWQGLLSIHM PAYYTSIMKG VSTVMISYSS WNEIKMHTNR ELITGFLKNT 300 LGFKGFVISD WEGLDRITYP PHANYSYSIQ AGIHAGIDMV MVPYNYKEFI DGLTFHVKNN 360 VIPMSRIDDA VRRILRVKFV VGLFENPLAD NSLVDQLGSQ EHRELAREAV RKSLVLLKNG 420 QSLNQPLLPL PKKTSKILVA GSHADDLGYQ CGGWTMEWQG FNGNNRTIGT TILAAIKNTV 480 DPITNVVYKE NPNAEFVKSN NFSYAIVVVG EHPYAETDGD SMNLTIADPG PTTIRNVCGA 540 MKCVVIIISG RPVVIEPYLA SIDALVAAWL PGTEGQGVAD VVFGDYGFTG KLPRTWFKTV 600 DQLPMNVGDP HYDPLYPFGF GITTEPTTRQ SDDNPFLSIS SYFN* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-38 | 36 | 623 | 661 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-50 | 414 | 623 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-78 | 41 | 623 | 655 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 7.0e-86 | 49 | 377 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 3.0e-86 | 48 | 455 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ15705.1 | 0 | 1 | 627 | 1 | 624 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 4 | 627 | 2 | 623 | unknown [Populus trichocarpa] |
RefSeq | XP_002266470.1 | 0 | 26 | 627 | 24 | 625 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 28 | 627 | 1 | 600 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 13 | 627 | 4 | 610 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 26 | 627 | 1 | 602 | A Chain A, Crystal Structure Of The Cell Surface Heme Transfer Protein Shp |
PDB | 1x38_A | 0 | 26 | 627 | 1 | 602 | A Chain A, Crystal Structure Of The Cell Surface Heme Transfer Protein Shp |
PDB | 1lq2_A | 0 | 26 | 627 | 1 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 26 | 629 | 1 | 604 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 26 | 629 | 1 | 604 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |