y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g008030.3 |
Family | GH3 |
Protein Properties | Length: 673 Molecular Weight: 73006 Isoelectric Point: 9.1417 |
Chromosome | Chromosome/Scaffold: 1 Start: 6942819 End: 6945729 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 152 | 386 | 0 |
STRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQSMTELIPGLQG DVPQNFTSGMPFAAGKNKVAACAKHFVGDGGTQNGINENNTIIDRDGLMSIHMPAYLDALRKGVSTVMISYSSWNGLKMHANHDLITRFLKGRLNFQGFT ISDWEGIDRITSPPGANYSYSVQASILAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 673 Download |
MVSWIPASPR PRLLPPLTDS HGRRARRPHQ VRRRLVPLLR RHRMALLTAP AVAALLLVFW 60 SAAYGGDAQG VPPYKDPKND VEVRVKDLLA RMTLAEKIGQ MTQIERLVAS PQVLKDYYIG 120 SLLSGGGSVP RKQATAAEWM AMISDFQKAC LSTRLGIPMI YGIDAVHGHN NVYGATIFPH 180 NVGLGATRDP NLVKRIGAAT ALEVRATGIQ YAFAPCIAVC RDPRWGRCYE SYSEDHRIVQ 240 SMTELIPGLQ GDVPQNFTSG MPFAAGKNKV AACAKHFVGD GGTQNGINEN NTIIDRDGLM 300 SIHMPAYLDA LRKGVSTVMI SYSSWNGLKM HANHDLITRF LKGRLNFQGF TISDWEGIDR 360 ITSPPGANYS YSVQASILAG IDMIMVPNNY QDFITILTGH VNSGLIPMSR IDDAVTRILR 420 VKFTMGLFEN PMPDPSLADQ LGKQEHRDLA REAVRKSLVL LKNGKPGDAP LLPLPKKAAK 480 ILVAGSHADN LGYQCGGWTI EWQGDTGRIT VGTTILDAVK AAVDPSTTVV FAENPDADFV 540 KNGGFSYAIV AVGEHPYTET KGDSLNLTIP DPGPSTVQTV CGAVRCATVL ISGRPVVIQP 600 FLGAMDALVA AWLPGTEGQG ITDVLFGDYG FTGKLPRTWF KSVDQLPMNY GDKKYDPLFP 660 LGFGLTTQGK GY* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 4.0e-32 | 135 | 657 | 576 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-41 | 458 | 666 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-72 | 61 | 666 | 681 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-79 | 92 | 525 | 444 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 6.0e-86 | 93 | 421 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1LQ2 | 0 | 74 | 668 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
GenBank | AAD23382.1 | 0 | 74 | 668 | 30 | 625 | AF102868_1 beta-D-glucan exohydrolase isoenzyme ExoI [Hordeum vulgare subsp. vulgare] |
GenBank | AAL58976.1 | 0 | 74 | 672 | 79 | 677 | AC091811_25 putative exohydrolase [Oryza sativa Japonica Group] |
RefSeq | NP_001051277.1 | 0 | 74 | 672 | 28 | 626 | Os03g0749500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001104913.1 | 0 | 65 | 672 | 22 | 632 | LOC541703 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 74 | 668 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1x38_A | 0 | 74 | 668 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1lq2_A | 0 | 74 | 668 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 74 | 668 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 74 | 668 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |