y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10005706 |
Family | GH3 |
Protein Properties | Length: 642 Molecular Weight: 70011.9 Isoelectric Point: 5.7833 |
Chromosome | Chromosome/Scaffold: 911 Start: 233064 End: 236342 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 115 | 351 | 0 |
LSTRLGIPMIYGIDAVHGHNNAYNATIFPHNVGLGATRDPELVKRIGAATALEIRATGIHYTFAPCVAVCRDPRWGRCYESYSEDPEVVKAMTELVTGLQ GDLPPDHSLEGFPYVAGKRNVAACAKHYVGDGGTVNGINGNNTVSDWKNIEEIQMAGYRSSITKGVSSIMASYSSLNGVKMHANRDMIAGFLKNTLNFTG FVISDWKGIDLITTPIHANYTYSVEKAINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 642 Download |
MGIRPRFGFG WKNHNLIMVL LGSTIALLLA DAEEYMVYKD PNQPVEARVR DLLGRMTLPE 60 KIGQMVQIDR SVASADVMKN YFIGSVLSGG GSVPEKGASP ETWIKMVDWF QSGALSTRLG 120 IPMIYGIDAV HGHNNAYNAT IFPHNVGLGA TRDPELVKRI GAATALEIRA TGIHYTFAPC 180 VAVCRDPRWG RCYESYSEDP EVVKAMTELV TGLQGDLPPD HSLEGFPYVA GKRNVAACAK 240 HYVGDGGTVN GINGNNTVSD WKNIEEIQMA GYRSSITKGV SSIMASYSSL NGVKMHANRD 300 MIAGFLKNTL NFTGFVISDW KGIDLITTPI HANYTYSVEK AINAGIDMVM VPLNYTEFIT 360 ELTQLVNTGF IPTTRIDDAV TRILRVKFSM GLFENPMSDQ SLANELGSPE HRELAREAVR 420 KSLVLLKNGK EANYQPLLPL PKKATKILVA GSHADNLGYQ CGGWSIEWQG FSGNNQTSGT 480 TILSAIRTAV DPATEVVYHE NPDTQYLSSN TFSYTIVIVG EHPYAESAGD NTNLTIPEPG 540 PTTIQNVCRS TKCVVLVISG RPLVIEPYLE MMDALIAAWL PGTEGRGVAD VLFGDYGFSG 600 KLPRTWFKRV DQLPMNVGDD EGYDPLFPFG FGLTTVPVMA N* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-42 | 44 | 634 | 647 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-53 | 423 | 634 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-80 | 56 | 466 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-83 | 57 | 386 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 7.0e-84 | 16 | 634 | 699 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ15705.1 | 0 | 16 | 640 | 6 | 626 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 17 | 637 | 4 | 622 | unknown [Populus trichocarpa] |
EMBL | CBI39076.1 | 0 | 34 | 640 | 24 | 635 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 34 | 640 | 24 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 36 | 637 | 1 | 599 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 34 | 635 | 1 | 599 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 1x38_A | 0 | 34 | 635 | 1 | 599 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 1lq2_A | 0 | 34 | 635 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 34 | 635 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 34 | 635 | 1 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |