y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10008434 |
Family | GH3 |
Protein Properties | Length: 745 Molecular Weight: 81292.3 Isoelectric Point: 7.0351 |
Chromosome | Chromosome/Scaffold: 61 Start: 178432 End: 185130 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 90 | 318 | 0 |
SSRLGIPLMYGVNAVHGHNSAYKATVFPHNVGLGATRDPGLVRRIGAATALEVRATGINYVFAPCIAVCRDPRWGRCYESYSEDPNIVKQMTEIIPGLQG DIPPHWKSGSPYVSGRDKVAACAKHYVGDGGTENGGNRGDAVGSFHSLLSIHMPAYLPSVIKGVSTIMTSYSTWNGEKIHNHKFLVTEFLKSTLRFRGFV ISDWKGVERTENYTDSVHAAISAGIDMVM |
Full Sequence |
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Protein Sequence Length: 745 Download |
MAGAESDQYK KYKDPTKPMN LRIRNLMRQM TLTEKIGQMV QIERTVASPD LIRNYSIGSV 60 MSDSGSVPSP TATPHEWITM INGFQTGAIS SRLGIPLMYG VNAVHGHNSA YKATVFPHNV 120 GLGATRDPGL VRRIGAATAL EVRATGINYV FAPCIAVCRD PRWGRCYESY SEDPNIVKQM 180 TEIIPGLQGD IPPHWKSGSP YVSGRDKVAA CAKHYVGDGG TENGGNRGDA VGSFHSLLSI 240 HMPAYLPSVI KGVSTIMTSY STWNGEKIHN HKFLVTEFLK STLRFRGFVI SDWKGVERTE 300 NYTDSVHAAI SAGIDMVMDP DDHTQFIKVL TELVNQKSIP MARIDDAVAR ILRVKFAMGL 360 FENPWADETY IDHLGSQAHR DLAREAVRKS LVLLKNGDNK TGPMLPLPKH SHRILIAGTH 420 ANNLGFQCGG WTTSHQGENG NNYTTGTTIL SGITSTVDPT TEIFFHTNPP ADFIEANNFS 480 YSIVVVGEIP YAESQGDNGN LTIPEAGLNA INNVCEWTKC VVVLVSGRPL VIQPYLSKIT 540 ALVAAWLPGT EGQGIADVLY GDYGFTGKLP RTWFKSVSQL PMNVGDKNYD PLFPFGFGIG 600 TKPVVIHDDC LDNCGNITVP YPFGIGDDPK CAISSSFLFK CKSSDSEQPR LVFGINITVH 660 SIFVDEGTFS GSMRAASSCY DETGRIGVYN DRNISLGFGP FRFSNVHNVG NMHHGLDFGV 720 IPKLRRICEL TGNLTLAQEL AETS* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-34 | 14 | 591 | 617 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-44 | 391 | 599 | 221 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 5.0e-72 | 23 | 599 | 670 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 2.0e-75 | 31 | 354 | 331 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 3.0e-81 | 30 | 435 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63654.1 | 0 | 10 | 605 | 6 | 606 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 8 | 603 | 24 | 624 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266589.1 | 0 | 10 | 605 | 26 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 10 | 605 | 26 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002271545.1 | 0 | 12 | 603 | 27 | 623 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 9 | 601 | 2 | 599 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 1x38_A | 0 | 9 | 601 | 2 | 599 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 1lq2_A | 0 | 9 | 601 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 9 | 601 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 9 | 601 | 2 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 428 | 58 | 480 | 0 |
FN998758 | 328 | 55 | 377 | 0 |
FN998735 | 317 | 55 | 366 | 0 |
FN998511 | 317 | 55 | 366 | 0 |
HO784016 | 51 | 9 | 59 | 0.0000000003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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