y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10028019m |
Family | GH3 |
Protein Properties | Length: 629 Molecular Weight: 67898.4 Isoelectric Point: 9.1253 |
Chromosome | Chromosome/Scaffold: 8 Start: 17659925 End: 17664551 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 105 | 340 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQ GDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGF VISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 629 Download |
MGRFSVPMLG FLLLCFLAAV TEATYIKYKD PKQPLGARIR DLMSRMTLAE KIGQMTQIER 60 AVATPDVMKQ FFIGSVLSGG GSVPAPKATA ETWVNMVNGL QKGALSTRLG IPMIYGIDAV 120 HGHNNVYKAT IFPHNVGLGV TRDPALVKKI GDATALEVRA TGIPYVFAPC IAVCRDPRWG 180 RCYESYSEDH KIVQAMTEII PGLQGDLPAN SKKGVPFVAG KKKVAACAKH YVGDGGTTKG 240 INENNTVINL NGLLSIHMPA YYNSISKGVA TVMVSYSSWN GKKMHANHEL VTGFLKNKLK 300 FRGFVISDWE GIDRITAPPH ANYSYSVQAG VSAGIDMVMV PNNYKEFIDD LTDQVKKNII 360 PMSRIDDAVK RILRVKFVMG LFDSPLADTS LVNELGSQEH RQLAREAVRK SLVLLKNGEA 420 ADKPLVPLPK KASKILVAGS HADNLGYQCG GWTITWQGLG GNDLTAGTTI LHAVSNTVDP 480 TTQVVFNENP DANFVKSNKF SHAIVVVGEQ PYAETYGDSL NLTISEPGLS TITNVCGAVK 540 CVVVVISGRP VVIQPYLAQI DALVAAWLPG TEGQGVADVL FGDYGFTGKL ARTWFKTVDQ 600 LPMNLGDPHY DPLFPFGFGL TTKPTKGN* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 8.0e-29 | 34 | 604 | 618 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-36 | 412 | 621 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-69 | 31 | 621 | 668 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 5.0e-78 | 46 | 455 | 421 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 6.0e-85 | 47 | 375 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 1 | 628 | 1 | 628 | beta-D-glucosidase [Gossypium hirsutum] |
RefSeq | XP_002278363.1 | 0 | 1 | 626 | 1 | 626 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002278377.1 | 0 | 1 | 626 | 1 | 627 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002313632.1 | 0 | 1 | 626 | 1 | 626 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 1 | 626 | 1 | 631 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 25 | 626 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1iex_A | 0 | 25 | 626 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1iew_A | 0 | 25 | 626 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1iev_A | 0 | 25 | 626 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1ieq_A | 0 | 25 | 626 | 2 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |