y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10017853m |
Family | GH3 |
Protein Properties | Length: 632 Molecular Weight: 69752.3 Isoelectric Point: 8.4285 |
Chromosome | Chromosome/Scaffold: 2 Start: 742039 End: 744165 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 109 | 345 | 0 |
MATRLGIPMIYGVDAVHGHNNVYKATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDAKLVQQFSVIISGLQ GDAPSKQVKKGRPFVGGKDKVAACAKHYVGDGGTVNGINENNTIVTTEQLFDIHMPPYWSALDQRVSTVMISYSSINGKKMHANKELVTEYLKEKLKFKG FTISDWEGIDRITSPPHSNYTYSVQESVLAGLDMIMV |
Full Sequence |
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Protein Sequence Length: 632 Download |
MKTKRSLIPL VGILFWCCCG LLVDGNDGPM IYKDPKQPVE VRVKDLLSRM TLGEKIGQMT 60 QIERVNATFD AMKNYFIGSV LSGGGSVPSP NATAQQWIDM VNDIQRGAMA TRLGIPMIYG 120 VDAVHGHNNV YKATIFPHNV GLGATRDPNL VKRIGAATAL EVRATGIPYA FAPCIAVCRD 180 PRWGRCYESY SEDAKLVQQF SVIISGLQGD APSKQVKKGR PFVGGKDKVA ACAKHYVGDG 240 GTVNGINENN TIVTTEQLFD IHMPPYWSAL DQRVSTVMIS YSSINGKKMH ANKELVTEYL 300 KEKLKFKGFT ISDWEGIDRI TSPPHSNYTY SVQESVLAGL DMIMVPYLYP EFINILTDLV 360 NKKVIPMRRI NDAVKRILRV KFEMGLFENP YADNSFVNKL GCKEHRELAR EAVRKSLVLL 420 KNGKQQSPPV LPLEKKLPKI LVAGTHADNL GYQCGGWTIE WQGDSGNNYT EGTTILRAIN 480 ATVDASTQVV FSERPDYNFV KDNNFSIGIV VVGEVPYAET KGDNTNLTLP WPAPDIINNV 540 CKATKCVVVL VSGRPLVIEP YVEAMDALVA AWLPGSEGQG VADALFGDSP FTGKLSRTWF 600 RRIDQVPMNF GDQNYDPLFP FGFGLQTTKV Y* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 6.0e-39 | 38 | 629 | 663 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-42 | 417 | 625 | 231 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 6.0e-80 | 35 | 628 | 675 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-82 | 50 | 459 | 417 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-86 | 51 | 380 | 334 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAR14129.1 | 0 | 32 | 630 | 27 | 623 | exo-beta-glucanase [Lilium longiflorum] |
GenBank | ABK95015.1 | 0 | 30 | 627 | 24 | 620 | unknown [Populus trichocarpa] |
RefSeq | NP_001051275.1 | 0 | 13 | 627 | 10 | 620 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 13 | 627 | 11 | 618 | exoglucanase1 [Zea mays] |
RefSeq | XP_002311926.1 | 0 | 5 | 627 | 3 | 630 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 30 | 627 | 3 | 599 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 1x38_A | 0 | 30 | 627 | 3 | 599 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 1lq2_A | 0 | 30 | 627 | 3 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 30 | 631 | 3 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 30 | 631 | 3 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |