y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G154000.1 |
Family | GH3 |
Protein Properties | Length: 412 Molecular Weight: 44263.6 Isoelectric Point: 6.5763 |
Chromosome | Chromosome/Scaffold: 09 Start: 12031551 End: 12037806 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 11 | 171 | 0 |
SSRLRIPMIYGIDVVHGHNNIYKDTTFPHNVGLGATRDPDLVKRIGAATALEVKATGIPYVFAPCIAVCRDPRWGRCYESYSENPKVVEMMTEIIPGLQG DVPPDSRKGVPCVGGNKDKVAACAKHFVGDGGTTKGINENNIVIGYHGLKSIHMPGYFHSI |
Full Sequence |
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Protein Sequence Length: 412 Download |
MISGFQNASL SSRLRIPMIY GIDVVHGHNN IYKDTTFPHN VGLGATRDPD LVKRIGAATA 60 LEVKATGIPY VFAPCIAVCR DPRWGRCYES YSENPKVVEM MTEIIPGLQG DVPPDSRKGV 120 PCVGGNKDKV AACAKHFVGD GGTTKGINEN NIVIGYHGLK SIHMPGYFHS IIKGFVISDW 180 EGIDMITYPP HSNYTESVLK GISAGIDMIM VPYNHTKFIN IMTDLAHRDL AREAVRKSPV 240 LLKNGENADD PVLPLPKKAS RILVAGIHAN NMGYQCGGWT ATWQGVDGNN YTAACPILSG 300 ISATVDPSTK IIYSKNPDAD FTPYAETAGD SLNLTIAEPG PSTILNVCGN VKCVVVTVSG 360 RPVVIEPYES QIDALVAAWL PGIEGQGVAD VLFGDYGFTG KLPQTWFKTV D* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 8.0e-8 | 360 | 410 | 52 | + beta-D-glucoside glucohydrolase; Provisional | ||
PRK15098 | PRK15098 | 2.0e-29 | 2 | 315 | 401 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-30 | 240 | 411 | 211 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 6.0e-50 | 12 | 282 | 344 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-50 | 6 | 212 | 246 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22347.1 | 0 | 1 | 411 | 1 | 504 | unnamed protein product [Vitis vinifera] |
EMBL | CBI22348.1 | 0 | 1 | 411 | 1 | 504 | unnamed protein product [Vitis vinifera] |
EMBL | CBI27259.1 | 0 | 1 | 411 | 1 | 504 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266589.1 | 0 | 1 | 411 | 96 | 599 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 1 | 411 | 96 | 599 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 411 | 73 | 576 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1iex_A | 0 | 1 | 411 | 73 | 576 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1iew_A | 0 | 1 | 411 | 73 | 576 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1iev_A | 0 | 1 | 411 | 73 | 576 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1ieq_A | 0 | 1 | 411 | 73 | 576 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 400 | 1 | 321 | 0 |
CV460575 | 252 | 7 | 223 | 0 |
FN998581 | 265 | 1 | 230 | 0 |
FN998615 | 265 | 1 | 230 | 0 |
FN998691 | 265 | 1 | 230 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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