Genome Details
Selected Rep_genome_ID: Rep_847
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium breve
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A163.bin_1 | 2,486,507 | 100% | 0.12% | China(Inner Mongolia) | Asia | IMGG |
| CGMR032949 | 2,190,033 | 100% | 0% | China | Asia | CGMR |
| Rep_847 | 2,226,458 | 100% | 0% | NA | NA | WIS |
| SPMP13_bin.24 | 2,227,536 | 93.33% | 1.04% | Singapore | Asia | SPMP |
| SPMP21_bin.56 | 2,195,215 | 98.28% | 1.06% | Singapore | Asia | SPMP |
| SPMP85_bin.46 | 2,456,542 | 99.26% | 4.65% | Singapore | Asia | SPMP |
| SPMP87_bin.3 | 2,136,119 | 97.62% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_847_CGC11 | CGCFAM_00105 | Yes | 5 | 2 | |
| Rep_847_CGC19 | CGCFAM_00391 | Yes | 9 | 1 | |
| Rep_847_CGC31 | CGCFAM_00408 | Yes | 3 | 1 | |
| Rep_847_CGC20 | CGCFAM_00526 | Yes | 7 | 2 | |
| Rep_847_CGC21 | CGCFAM_00583 | Yes | 9 | 2 | alpha-glucan/galactan |
| Rep_847_CGC28 | CGCFAM_00825 | Yes | 9 | 3 | alpha-glucan |
| Rep_847_CGC13 | CGCFAM_01282 | Yes | 9 | 2 | |
| Rep_847_CGC23 | CGCFAM_01325 | Yes | 4 | 2 | |
| Rep_847_CGC15 | CGCFAM_01936 | Yes | 9 | 2 | |
| Rep_847_CGC26 | CGCFAM_03416 | Yes | 5 | 1 | |
| Rep_847_CGC27 | CGCFAM_04143 | Yes | 4 | 1 | alpha-glucan |
| Rep_847_CGC17 | CGCFAM_05936 | Yes | 10 | 2 | |
| PUL0347_Rep_847_C0 | CGCFAM_06400 | Yes | 12 | 1 | alpha-glucan |
Top CAZyme Families