Cluster: PUL0347_Rep_847_C0
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: Rep_847
- CGC Family ID: CGCFAM_06400
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0347_Rep_847_C0 | Rep_847_c_1_208 | 266519 | 268966 | - | GH13_11 |
| pfam | PUL0347_Rep_847_C0 | Rep_847_c_1_209 | 269262 | 270266 | + | ADH_zinc_N | ADH_N |
| TC | PUL0347_Rep_847_C0 | Rep_847_c_1_210 | 270452 | 271825 | + | 2.A.1.18.2 |
| STP | PUL0347_Rep_847_C0 | Rep_847_c_1_211 | 271899 | 272297 | + | Glyoxalase |
| TF | PUL0347_Rep_847_C0 | Rep_847_c_1_212 | 272377 | 273525 | - | MarR |
| TC | PUL0347_Rep_847_C0 | Rep_847_c_1_213 | 273746 | 275083 | + | 2.A.1.18.1 |
| pfam | PUL0347_Rep_847_C0 | Rep_847_c_1_214 | 275195 | 276235 | + | ADH_zinc_N | ADH_N | ADH_zinc_N_2 | Glu_dehyd_C |
| TF | PUL0347_Rep_847_C0 | Rep_847_c_1_215 | 276316 | 277263 | + | HTH_AraC | HTH_AraC |
| pfam | PUL0347_Rep_847_C0 | Rep_847_c_1_216 | 277672 | 280395 | + | Aldedh | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | PUL0347_Rep_847_C0 | Rep_847_c_1_217 | 280686 | 281582 | - | YwiC |
| pfam | PUL0347_Rep_847_C0 | Rep_847_c_1_218 | 281939 | 282712 | - | AAL_decarboxy |
| pfam | PUL0347_Rep_847_C0 | Rep_847_c_1_219 | 283161 | 283469 | + | Ribosomal_S10 |
Gene ID: Rep_847_c_1_208
Type: CAZyme
Location: 266519 - 268966 (-)
Type: CAZyme
Location: 266519 - 268966 (-)
Gene ID: Rep_847_c_1_209
Type: pfam
Location: 269262 - 270266 (+)
Type: pfam
Location: 269262 - 270266 (+)
Gene ID: Rep_847_c_1_210
Type: TC
Location: 270452 - 271825 (+)
Type: TC
Location: 270452 - 271825 (+)
Gene ID: Rep_847_c_1_211
Type: STP
Location: 271899 - 272297 (+)
Type: STP
Location: 271899 - 272297 (+)
Gene ID: Rep_847_c_1_212
Type: TF
Location: 272377 - 273525 (-)
Type: TF
Location: 272377 - 273525 (-)
Gene ID: Rep_847_c_1_213
Type: TC
Location: 273746 - 275083 (+)
Type: TC
Location: 273746 - 275083 (+)
Gene ID: Rep_847_c_1_214
Type: pfam
Location: 275195 - 276235 (+)
Type: pfam
Location: 275195 - 276235 (+)
Gene ID: Rep_847_c_1_215
Type: TF
Location: 276316 - 277263 (+)
Type: TF
Location: 276316 - 277263 (+)
Gene ID: Rep_847_c_1_216
Type: pfam
Location: 277672 - 280395 (+)
Type: pfam
Location: 277672 - 280395 (+)
Gene ID: Rep_847_c_1_217
Type: pfam
Location: 280686 - 281582 (-)
Type: pfam
Location: 280686 - 281582 (-)
Gene ID: Rep_847_c_1_218
Type: pfam
Location: 281939 - 282712 (-)
Type: pfam
Location: 281939 - 282712 (-)
Gene ID: Rep_847_c_1_219
Type: pfam
Location: 283161 - 283469 (+)
Type: pfam
Location: 283161 - 283469 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium breve
Gene Composition
Loading chart...
← Back to Cluster List