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Cluster: Rep_847_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_847_c_1 Rep_847_c_1_205 262971 265184 + GH77
pfam Rep_847_c_1 Rep_847_c_1_206 265472 265921 + Ribosomal_L13
pfam Rep_847_c_1 Rep_847_c_1_207 265944 266435 + Ribosomal_S9
CAZyme Rep_847_c_1 Rep_847_c_1_208 266519 268966 - GH13_11
pfam Rep_847_c_1 Rep_847_c_1_209 269262 270266 + ADH_zinc_N | ADH_N
TC Rep_847_c_1 Rep_847_c_1_210 270452 271825 + 2.A.1.18.2
STP Rep_847_c_1 Rep_847_c_1_211 271899 272297 + Glyoxalase
TF Rep_847_c_1 Rep_847_c_1_212 272377 273525 - MarR
TC Rep_847_c_1 Rep_847_c_1_213 273746 275083 + 2.A.1.18.1
Gene ID: Rep_847_c_1_205
Type: CAZyme
Location: 262971 - 265184 (+)
Gene ID: Rep_847_c_1_206
Type: pfam
Location: 265472 - 265921 (+)
Gene ID: Rep_847_c_1_207
Type: pfam
Location: 265944 - 266435 (+)
Gene ID: Rep_847_c_1_208
Type: CAZyme
Location: 266519 - 268966 (-)
Gene ID: Rep_847_c_1_209
Type: pfam
Location: 269262 - 270266 (+)
Gene ID: Rep_847_c_1_210
Type: TC
Location: 270452 - 271825 (+)
Gene ID: Rep_847_c_1_211
Type: STP
Location: 271899 - 272297 (+)
Gene ID: Rep_847_c_1_212
Type: TF
Location: 272377 - 273525 (-)
Gene ID: Rep_847_c_1_213
Type: TC
Location: 273746 - 275083 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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