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Cluster: Rep_847_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_1 Rep_847_c_1_301 364206 364841 - 3.A.1.114.1
pfam Rep_847_c_1 Rep_847_c_1_302 364854 366077 - FtsX
pfam Rep_847_c_1 Rep_847_c_1_303 366074 367441 - FtsX
CAZyme Rep_847_c_1 Rep_847_c_1_304 368076 370097 - GH20
pfam Rep_847_c_1 Rep_847_c_1_305 370345 371520 - ROK
TC Rep_847_c_1 Rep_847_c_1_306 371750 373075 + 3.A.1.1.44
NULL(UNKNOWN) Rep_847_c_1 Rep_847_c_1_307 373462 373710 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_847_c_1 Rep_847_c_1_308 373791 374801 + LacI
CAZyme Rep_847_c_1 Rep_847_c_1_309 375001 378138 - GH2
TC Rep_847_c_1 Rep_847_c_1_310 378506 379987 + 2.A.2.2.3
Gene ID: Rep_847_c_1_301
Type: TC
Location: 364206 - 364841 (-)
Gene ID: Rep_847_c_1_302
Type: pfam
Location: 364854 - 366077 (-)
Gene ID: Rep_847_c_1_303
Type: pfam
Location: 366074 - 367441 (-)
Gene ID: Rep_847_c_1_304
Type: CAZyme
Location: 368076 - 370097 (-)
Gene ID: Rep_847_c_1_305
Type: pfam
Location: 370345 - 371520 (-)
Gene ID: Rep_847_c_1_306
Type: TC
Location: 371750 - 373075 (+)
Gene ID: Rep_847_c_1_307
Type:
Location: 373462 - 373710 (+)
Gene ID: Rep_847_c_1_308
Type: TF
Location: 373791 - 374801 (+)
Gene ID: Rep_847_c_1_309
Type: CAZyme
Location: 375001 - 378138 (-)
Gene ID: Rep_847_c_1_310
Type: TC
Location: 378506 - 379987 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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