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Cluster: Rep_847_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_1 Rep_847_c_1_501 607314 609665 - 3.A.1.33.1
pfam Rep_847_c_1 Rep_847_c_1_502 609679 610335 - ECF-ribofla_trS | ECF_trnsprt
CAZyme Rep_847_c_1 Rep_847_c_1_503 610626 611639 + GT2
STP Rep_847_c_1 Rep_847_c_1_504 611778 612560 - Nitroreductase
pfam Rep_847_c_1 Rep_847_c_1_505 612789 613556 + ROK
CAZyme Rep_847_c_1 Rep_847_c_1_506 613700 615256 - GH32
TC Rep_847_c_1 Rep_847_c_1_507 615421 616746 - 2.A.1.5.3
Gene ID: Rep_847_c_1_501
Type: TC
Location: 607314 - 609665 (-)
Gene ID: Rep_847_c_1_502
Type: pfam
Location: 609679 - 610335 (-)
Gene ID: Rep_847_c_1_503
Type: CAZyme
Location: 610626 - 611639 (+)
Gene ID: Rep_847_c_1_504
Type: STP
Location: 611778 - 612560 (-)
Gene ID: Rep_847_c_1_505
Type: pfam
Location: 612789 - 613556 (+)
Gene ID: Rep_847_c_1_506
Type: CAZyme
Location: 613700 - 615256 (-)
Gene ID: Rep_847_c_1_507
Type: TC
Location: 615421 - 616746 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_847_c_1_502 vegan > omnivore 1.44713 0.00973
Rep_847_c_1_502 vegetarian > omnivore 1.32879 0.00272
Rep_847_c_1_505 vegan > omnivore 1.06114 0.01052

🧭 Explore Read Mapping of CGC

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