dbCAN Logo

Cluster: Rep_847_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_1 Rep_847_c_1_154 206553 207140 - 2.A.95.1.1
TF Rep_847_c_1 Rep_847_c_1_155 207266 208282 - LacI
TC Rep_847_c_1 Rep_847_c_1_156 208436 209719 + 3.A.1.1.20
TC Rep_847_c_1 Rep_847_c_1_157 209744 210688 + 3.A.1.1.23
TC Rep_847_c_1 Rep_847_c_1_158 210685 211506 + 3.A.1.1.11
CAZyme Rep_847_c_1 Rep_847_c_1_159 211669 214002 + GH65
TC Rep_847_c_1 Rep_847_c_1_160 213999 214907 + 2.A.7.3.52
pfam Rep_847_c_1 Rep_847_c_1_161 214970 215611 + Hydrolase | HAD_2
CAZyme Rep_847_c_1 Rep_847_c_1_162 215750 218914 + GH2
Gene ID: Rep_847_c_1_154
Type: TC
Location: 206553 - 207140 (-)
Gene ID: Rep_847_c_1_155
Type: TF
Location: 207266 - 208282 (-)
Gene ID: Rep_847_c_1_156
Type: TC
Location: 208436 - 209719 (+)
Gene ID: Rep_847_c_1_157
Type: TC
Location: 209744 - 210688 (+)
Gene ID: Rep_847_c_1_158
Type: TC
Location: 210685 - 211506 (+)
Gene ID: Rep_847_c_1_159
Type: CAZyme
Location: 211669 - 214002 (+)
Gene ID: Rep_847_c_1_160
Type: TC
Location: 213999 - 214907 (+)
Gene ID: Rep_847_c_1_161
Type: pfam
Location: 214970 - 215611 (+)
Gene ID: Rep_847_c_1_162
Type: CAZyme
Location: 215750 - 218914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List