Genome Details
Selected Rep_genome_ID: Rep_800
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas aeruginosa
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_800 | 6,643,167 | 99.026% | 0.108225% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_800_CGC12 | CGCFAM_00003 | Yes | 9 | 3 | |
| Rep_800_CGC6 | CGCFAM_00124 | Yes | 4 | 2 | |
| Rep_800_CGC35 | CGCFAM_00144 | Yes | 10 | 2 | |
| Rep_800_CGC4 | CGCFAM_00293 | Yes | 9 | 1 | |
| Rep_800_CGC16 | CGCFAM_00359 | Yes | 6 | 1 | |
| Rep_800_CGC1 | CGCFAM_00529 | Yes | 7 | 3 | |
| Rep_800_CGC43 | CGCFAM_00853 | Yes | 5 | 1 | |
| Rep_800_CGC25 | CGCFAM_01364 | Yes | 8 | 1 | |
| Rep_800_CGC36 | CGCFAM_01409 | Yes | 3 | 1 | |
| Rep_800_CGC21 | CGCFAM_01454 | Yes | 3 | 1 | |
| Rep_800_CGC34 | CGCFAM_01485 | Yes | 15 | 2 | alginate |
| Rep_800_CGC22 | CGCFAM_01751 | Yes | 7 | 1 | |
| Rep_800_CGC7 | CGCFAM_02799 | Yes | 3 | 1 | |
| Rep_800_CGC27 | CGCFAM_03103 | Yes | 8 | 3 | |
| Rep_800_CGC13 | CGCFAM_03688 | Yes | 12 | 6 | |
| Rep_800_CGC28 | CGCFAM_04111 | Yes | 8 | 1 | |
| Rep_800_CGC11 | CGCFAM_05193 | Yes | 4 | 1 | |
| Rep_800_CGC10 | CGCFAM_05521 | Yes | 3 | 1 | |
| Rep_800_CGC15 | CGCFAM_06286 | Yes | 10 | 1 | |
| Rep_800_CGC46 | CGCFAM_06343 | Yes | 7 | 1 |
Top CAZyme Families