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Cluster: Rep_800_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_800_c_37 Rep_800_c_37_81 93265 95850 + GT2
TC Rep_800_c_37 Rep_800_c_37_82 96088 96888 + 3.A.1.3.27
TC Rep_800_c_37 Rep_800_c_37_83 96954 97916 + 3.A.1.3.17
TC Rep_800_c_37 Rep_800_c_37_84 97909 98643 + 3.A.1.3.8
pfam Rep_800_c_37 Rep_800_c_37_85 98651 99112 - UPF0158
TC Rep_800_c_37 Rep_800_c_37_86 99222 101165 - 1.B.52.2.1
pfam Rep_800_c_37 Rep_800_c_37_87 101377 102084 - Methyltrans_RNA
TC Rep_800_c_37 Rep_800_c_37_88 102081 102884 - 2.A.64.1.1
Gene ID: Rep_800_c_37_81
Type: CAZyme
Location: 93265 - 95850 (+)
Gene ID: Rep_800_c_37_82
Type: TC
Location: 96088 - 96888 (+)
Gene ID: Rep_800_c_37_83
Type: TC
Location: 96954 - 97916 (+)
Gene ID: Rep_800_c_37_84
Type: TC
Location: 97909 - 98643 (+)
Gene ID: Rep_800_c_37_85
Type: pfam
Location: 98651 - 99112 (-)
Gene ID: Rep_800_c_37_86
Type: TC
Location: 99222 - 101165 (-)
Gene ID: Rep_800_c_37_87
Type: pfam
Location: 101377 - 102084 (-)
Gene ID: Rep_800_c_37_88
Type: TC
Location: 102081 - 102884 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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