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Cluster: Rep_800_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_800_c_8 Rep_800_c_8_1 161 1477 - 3.A.7.9.1
pfam Rep_800_c_8 Rep_800_c_8_2 1765 2169 + 4HBT
CAZyme Rep_800_c_8 Rep_800_c_8_3 2215 3900 - AA3_2
sulfatase Rep_800_c_8 Rep_800_c_8_4 4036 5508 - S1_6
STP Rep_800_c_8 Rep_800_c_8_5 5569 6162 - TetR_N
TC Rep_800_c_8 Rep_800_c_8_6 6441 8045 + 2.A.15.1.3
TC Rep_800_c_8 Rep_800_c_8_7 8264 9442 - 3.A.1.12.12
TC Rep_800_c_8 Rep_800_c_8_8 9446 10285 - 3.A.1.12.12
TC Rep_800_c_8 Rep_800_c_8_9 10327 11265 - 3.A.1.12.12
Gene ID: Rep_800_c_8_1
Type: TC
Location: 161 - 1477 (-)
Gene ID: Rep_800_c_8_2
Type: pfam
Location: 1765 - 2169 (+)
Gene ID: Rep_800_c_8_3
Type: CAZyme
Location: 2215 - 3900 (-)
Gene ID: Rep_800_c_8_4
Type: sulfatase
Location: 4036 - 5508 (-)
Gene ID: Rep_800_c_8_5
Type: STP
Location: 5569 - 6162 (-)
Gene ID: Rep_800_c_8_6
Type: TC
Location: 6441 - 8045 (+)
Gene ID: Rep_800_c_8_7
Type: TC
Location: 8264 - 9442 (-)
Gene ID: Rep_800_c_8_8
Type: TC
Location: 9446 - 10285 (-)
Gene ID: Rep_800_c_8_9
Type: TC
Location: 10327 - 11265 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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