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Cluster: Rep_800_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_800_c_44 Rep_800_c_44_69 82929 83948 + GT2
pfam Rep_800_c_44 Rep_800_c_44_70 83945 85933 + Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam Rep_800_c_44 Rep_800_c_44_71 85930 86817 + Polysacc_deac_1
CAZyme Rep_800_c_44 Rep_800_c_44_72 86814 88463 + GT83
TC Rep_800_c_44 Rep_800_c_44_73 88460 88807 + 2.A.7.22.1
NULL(UNKNOWN) Rep_800_c_44 Rep_800_c_44_74 88804 89217 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_800_c_44 Rep_800_c_44_75 89214 90608 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC Rep_800_c_44 Rep_800_c_44_76 90762 92519 - 4.A.2.1.17
STP Rep_800_c_44 Rep_800_c_44_77 92521 93465 - PfkB
TC Rep_800_c_44 Rep_800_c_44_78 93465 96335 - 4.A.2.1.17
Gene ID: Rep_800_c_44_69
Type: CAZyme
Location: 82929 - 83948 (+)
Gene ID: Rep_800_c_44_70
Type: pfam
Location: 83945 - 85933 (+)
Gene ID: Rep_800_c_44_71
Type: pfam
Location: 85930 - 86817 (+)
Gene ID: Rep_800_c_44_72
Type: CAZyme
Location: 86814 - 88463 (+)
Gene ID: Rep_800_c_44_73
Type: TC
Location: 88460 - 88807 (+)
Gene ID: Rep_800_c_44_74
Type:
Location: 88804 - 89217 (+)
Gene ID: Rep_800_c_44_75
Type: pfam
Location: 89214 - 90608 (+)
Gene ID: Rep_800_c_44_76
Type: TC
Location: 90762 - 92519 (-)
Gene ID: Rep_800_c_44_77
Type: STP
Location: 92521 - 93465 (-)
Gene ID: Rep_800_c_44_78
Type: TC
Location: 93465 - 96335 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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