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Cluster: Rep_800_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_800_c_37 Rep_800_c_37_167 201626 202438 - 8.A.5.1.4
pfam Rep_800_c_37 Rep_800_c_37_168 202435 203610 - FAD_binding_2 | DAO
TC Rep_800_c_37 Rep_800_c_37_169 203671 204003 - 2.A.7.1.11
TF Rep_800_c_37 Rep_800_c_37_170 204088 204972 + HTH_1
CAZyme Rep_800_c_37 Rep_800_c_37_171 205008 206285 + GT30
TF Rep_800_c_37 Rep_800_c_37_172 206334 206933 - HTH_3
STP Rep_800_c_37 Rep_800_c_37_173 207011 208957 - Pyr_redox_2
TC Rep_800_c_37 Rep_800_c_37_174 209131 210222 + 3.A.1.11.6
Gene ID: Rep_800_c_37_167
Type: TC
Location: 201626 - 202438 (-)
Gene ID: Rep_800_c_37_168
Type: pfam
Location: 202435 - 203610 (-)
Gene ID: Rep_800_c_37_169
Type: TC
Location: 203671 - 204003 (-)
Gene ID: Rep_800_c_37_170
Type: TF
Location: 204088 - 204972 (+)
Gene ID: Rep_800_c_37_171
Type: CAZyme
Location: 205008 - 206285 (+)
Gene ID: Rep_800_c_37_172
Type: TF
Location: 206334 - 206933 (-)
Gene ID: Rep_800_c_37_173
Type: STP
Location: 207011 - 208957 (-)
Gene ID: Rep_800_c_37_174
Type: TC
Location: 209131 - 210222 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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