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Cluster: Rep_800_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_800_c_26 Rep_800_c_26_225 225898 226950 + 1.B.6.1.2
pfam Rep_800_c_26 Rep_800_c_26_226 227019 227756 - TP_methylase
TC Rep_800_c_26 Rep_800_c_26_227 227768 230494 - 3.D.1.9.2
pfam Rep_800_c_26 Rep_800_c_26_228 230521 230847 - Rieske | Rieske_2
STP Rep_800_c_26 Rep_800_c_26_229 230900 233350 - NIR_SIR | NIR_SIR_ferr | Pyr_redox_2
TC Rep_800_c_26 Rep_800_c_26_230 233618 235285 - 9.B.106.3.1
TC Rep_800_c_26 Rep_800_c_26_231 235288 236499 - 2.A.1.8.2
CAZyme Rep_800_c_26 Rep_800_c_26_232 236853 237548 - PL7_1
STP Rep_800_c_26 Rep_800_c_26_233 237778 238356 - ANTAR | Response_reg
TC Rep_800_c_26 Rep_800_c_26_234 238373 239581 - 3.A.1.16.2
Gene ID: Rep_800_c_26_225
Type: TC
Location: 225898 - 226950 (+)
Gene ID: Rep_800_c_26_226
Type: pfam
Location: 227019 - 227756 (-)
Gene ID: Rep_800_c_26_227
Type: TC
Location: 227768 - 230494 (-)
Gene ID: Rep_800_c_26_228
Type: pfam
Location: 230521 - 230847 (-)
Gene ID: Rep_800_c_26_229
Type: STP
Location: 230900 - 233350 (-)
Gene ID: Rep_800_c_26_230
Type: TC
Location: 233618 - 235285 (-)
Gene ID: Rep_800_c_26_231
Type: TC
Location: 235288 - 236499 (-)
Gene ID: Rep_800_c_26_232
Type: CAZyme
Location: 236853 - 237548 (-)
Gene ID: Rep_800_c_26_233
Type: STP
Location: 237778 - 238356 (-)
Gene ID: Rep_800_c_26_234
Type: TC
Location: 238373 - 239581 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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