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Genome Details

Selected Rep_genome_ID: Rep_556
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides sp900540715
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_556 5,935,659 98.6196% 0.128205% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_556_CGC101 CGCFAM_00001 Yes 6 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_556_CGC12 CGCFAM_00001 Yes 9 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_556_CGC22 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_556_CGC40 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_556_CGC82 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_556_CGC91 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_556_CGC108 CGCFAM_00003 Yes 5 2
Rep_556_CGC32 CGCFAM_00006 Yes 12 7
Rep_556_CGC68 CGCFAM_00007 Yes 10 5
Rep_556_CGC52 CGCFAM_00023 Yes 3 1
Rep_556_CGC102 - Yes 9 2 N/A
Rep_556_CGC35 CGCFAM_00147 Yes 4 1
Rep_556_CGC61 CGCFAM_00147 Yes 4 1
Rep_556_CGC30 CGCFAM_00148 Yes 8 5
Rep_556_CGC95 CGCFAM_00158 Yes 7 1
Rep_556_CGC7 CGCFAM_00256 Yes 6 2
Rep_556_CGC60 CGCFAM_00274 Yes 7 2
Rep_556_CGC66 CGCFAM_00304 Yes 6 1
Rep_556_CGC84 CGCFAM_00436 Yes 8 1
Rep_556_CGC6 CGCFAM_00512 Yes 7 1
Rep_556_CGC24 CGCFAM_00732 Yes 5 2
Rep_556_CGC94 CGCFAM_00759 Yes 3 2
Rep_556_CGC3 CGCFAM_00892 Yes 4 1
Rep_556_CGC29 CGCFAM_01173 Yes 12 4
Rep_556_CGC1 CGCFAM_01225 Yes 5 1
Top CAZyme Families