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Cluster: Rep_556_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_556_c_12 Rep_556_c_12_68 75396 76931 - 8.A.46.1.6
TC Rep_556_c_12 Rep_556_c_12_69 76985 80065 - 1.B.14.6.1
CAZyme Rep_556_c_12 Rep_556_c_12_70 80304 83144 + GH3
CAZyme Rep_556_c_12 Rep_556_c_12_71 83152 85431 + GH92
CAZyme Rep_556_c_12 Rep_556_c_12_72 85452 86846 + GH3
sulfatase Rep_556_c_12 Rep_556_c_12_73 86830 88032 + S1_15
CAZyme Rep_556_c_12 Rep_556_c_12_74 88056 89021 + GH43_2
CAZyme Rep_556_c_12 Rep_556_c_12_75 89034 90014 + GH43_2
Gene ID: Rep_556_c_12_68
Type: TC
Location: 75396 - 76931 (-)
Gene ID: Rep_556_c_12_69
Type: TC
Location: 76985 - 80065 (-)
Gene ID: Rep_556_c_12_70
Type: CAZyme
Location: 80304 - 83144 (+)
Gene ID: Rep_556_c_12_71
Type: CAZyme
Location: 83152 - 85431 (+)
Gene ID: Rep_556_c_12_72
Type: CAZyme
Location: 85452 - 86846 (+)
Gene ID: Rep_556_c_12_73
Type: sulfatase
Location: 86830 - 88032 (+)
Gene ID: Rep_556_c_12_74
Type: CAZyme
Location: 88056 - 89021 (+)
Gene ID: Rep_556_c_12_75
Type: CAZyme
Location: 89034 - 90014 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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