dbCAN Logo

Cluster: Rep_556_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_556_c_14 Rep_556_c_14_12 16401 17648 - GT2
CAZyme Rep_556_c_14 Rep_556_c_14_13 17756 18919 + GT2
peptidase Rep_556_c_14 Rep_556_c_14_14 18926 20728 + C44.UNW
TC Rep_556_c_14 Rep_556_c_14_15 20740 22176 + 2.A.66.2.6
CAZyme Rep_556_c_14 Rep_556_c_14_16 22166 23236 + GT2
NULL(UNKNOWN) Rep_556_c_14 Rep_556_c_14_17 23276 25315 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_556_c_14 Rep_556_c_14_18 25362 26414 - Acyl_transf_3
CAZyme Rep_556_c_14 Rep_556_c_14_19 26439 27326 - GT2
pfam Rep_556_c_14 Rep_556_c_14_20 27332 27955 - Hexapep | Hexapep_2 | Hexapep_2
CAZyme Rep_556_c_14 Rep_556_c_14_21 27924 29150 - GT4
CAZyme Rep_556_c_14 Rep_556_c_14_22 29159 30286 - GT4
CAZyme Rep_556_c_14 Rep_556_c_14_23 30292 31479 - GT2
Gene ID: Rep_556_c_14_12
Type: CAZyme
Location: 16401 - 17648 (-)
Gene ID: Rep_556_c_14_13
Type: CAZyme
Location: 17756 - 18919 (+)
Gene ID: Rep_556_c_14_14
Type: peptidase
Location: 18926 - 20728 (+)
Gene ID: Rep_556_c_14_15
Type: TC
Location: 20740 - 22176 (+)
Gene ID: Rep_556_c_14_16
Type: CAZyme
Location: 22166 - 23236 (+)
Gene ID: Rep_556_c_14_17
Type:
Location: 23276 - 25315 (-)
Gene ID: Rep_556_c_14_18
Type: pfam
Location: 25362 - 26414 (-)
Gene ID: Rep_556_c_14_19
Type: CAZyme
Location: 26439 - 27326 (-)
Gene ID: Rep_556_c_14_20
Type: pfam
Location: 27332 - 27955 (-)
Gene ID: Rep_556_c_14_21
Type: CAZyme
Location: 27924 - 29150 (-)
Gene ID: Rep_556_c_14_22
Type: CAZyme
Location: 29159 - 30286 (-)
Gene ID: Rep_556_c_14_23
Type: CAZyme
Location: 30292 - 31479 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List