PROTEIN: Rep_556_c_14_17
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Protein File & Metadata
Source:
Rep_556_c_14_17.pdb
Genome ID:
Protein ID:
Rep_556_c_14_17
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Protein Sequence
MKKLVAALIV IFMTSSCLKD AIDLLDKTIN QTFTLKLPTI KDNIEIPNKI NCYIFKDSVL 60 YKVLHNLTIE SDSRIVIDVP STAQLYFLAN TEEPLSLASL KEGEKNLSSF LLICNENIEH 120 NQWGGAIFYS GSVMIDPALN TDNRIELLAS VAQIDIDAGS NELIQIDSIE MSGASLTTPL 180 FKGVGPVSST NKQKYLHSFP EPVSGIIHNV FRPYESITPV EFKINGTYNK IAFVIDTIIP 240 ILERNKTYTL EIEDKDIKIL PDTNVHIIIP DSKGRIDIHA DQTKKIQPGS TIYLVGNFLS 300 VRLTGLKGNA EHPIRITNYP GKKLVIGNPD WAGGANSSAI QLLECQHIIL GSENNAADFL 360 INGSTSKVRS AYFGVNLRPF TDNVEVKNIT IKNGGTGILA KTDPEKNNSK TWYPNTVLEN 420 LSIHDVIISG VSTEGMYIGH TSVWWGWDEA GKGYNAGAKP NNPGHTYVMP VKWKNVKIYQ 480 NHVSKSGYDG IQASAIDQLE IYENEVSDFG TDNTWGQSMG IIVGGRTTFT NVHDNYVHDG 540 TGEIFQFHGS GENNSTHFIH NNLFINSQSS GMGIYGLIDA ATINITNNTI VGCQVFAIQV 600 NGKSYETLVK LSNNVFAECY QKDLSSPKYI RIMNKGKVEE SENKQFDSIT NAKLDPDNFY 660 QPLPGSSIGN AGYRHTSKR 679
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0T6BTQ7-F1-model_v4 | PL9_2 | 11 | 674 | 3 | 468 | 0.5992 |
0.7183 |
| AF-A0A0H3E0R0-F1-model_v4 | PL9_2 | 187 | 674 | 15 | 468 | 0.5922 |
0.7275 |
| AF-A0A7G7UMG4-F1-model_v4 | PL9_2 | 9 | 674 | 3 | 468 | 0.5917 |
0.7095 |
| AF-Q65IY0-F1-model_v4 | PL9_2 | 184 | 674 | 14 | 468 | 0.591 |
0.7245 |
| AF-A0A7G9L6R0-F1-model_v4 | GH136 | 261 | 676 | 7 | 482 | 0.5776 |
0.7823 |
| AF-A0A1H1XYF6-F1-model_v4 | GH136 | 261 | 676 | 17 | 484 | 0.5717 |
0.7798 |
| AF-A0A0N7HYJ3-F1-model_v4 | GH136 | 167 | 674 | 21 | 500 | 0.5653 |
0.6865 |
| UOH78141.1 | GH136 | 261 | 674 | 17 | 491 | 0.5599 |
0.7738 |
| AF-A0A5B9WRX5-F1-model_v4 | GH136 | 261 | 677 | 21 | 498 | 0.5573 |
0.7838 |
| AF-A0A6G7BU16-F1-model_v4 | PL9_2 | 261 | 678 | 37 | 501 | 0.55 |
0.7688 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7W7AW79 | GH136 | 261 | 679 | 17 | 476 | 0.5648 |
0.7684 |
| F4A0T9 | GH160 | 261 | 671 | 12 | 451 | 0.5631 |
0.7515 |
| UOH78141.1 | GH136 | 261 | 674 | 17 | 491 | 0.5599 |
0.7738 |
| A0A5B9WRX5 | GH136 | 261 | 677 | 21 | 498 | 0.5573 |
0.7838 |
| A0A2D1U713 | PL9_2 | 260 | 678 | 43 | 509 | 0.5454 |
0.7652 |
| A0A517MWE6 | GH136 | 165 | 676 | 29 | 510 | 0.5446 |
0.6641 |
| A0A3S5YNB7 | GH136 | 261 | 676 | 68 | 564 | 0.5415 |
0.7978 |
| A0A9E8TF98 | GH136 | 165 | 678 | 26 | 492 | 0.5408 |
0.6742 |
| A0A5B8W737 | PL9_2 | 260 | 678 | 34 | 491 | 0.5333 |
0.7321 |
| QRR02447.1 | GH136 | 260 | 677 | 42 | 545 | 0.5239 |
0.7645 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7v6i-assembly1.cif.gz_A | 163 | 678 | 2 | 585 | 0.4912 |
0.607 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.