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Cluster: Rep_556_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_556_c_0 Rep_556_c_0_137 209744 211963 + 1.B.14.6.2
TC Rep_556_c_0 Rep_556_c_0_138 211970 213193 + 1.B.14.6.2
TC Rep_556_c_0 Rep_556_c_0_139 213231 214952 + 8.A.46.2.1
NULL(UNKNOWN) Rep_556_c_0 Rep_556_c_0_140 215047 215388 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_556_c_0 Rep_556_c_0_141 215495 216898 - GH29
TC Rep_556_c_0 Rep_556_c_0_142 216987 218477 - 8.A.46.1.3
TC Rep_556_c_0 Rep_556_c_0_143 218499 221915 - 1.B.14.6.1
Gene ID: Rep_556_c_0_137
Type: TC
Location: 209744 - 211963 (+)
Gene ID: Rep_556_c_0_138
Type: TC
Location: 211970 - 213193 (+)
Gene ID: Rep_556_c_0_139
Type: TC
Location: 213231 - 214952 (+)
Gene ID: Rep_556_c_0_140
Type:
Location: 215047 - 215388 (+)
Gene ID: Rep_556_c_0_141
Type: CAZyme
Location: 215495 - 216898 (-)
Gene ID: Rep_556_c_0_142
Type: TC
Location: 216987 - 218477 (-)
Gene ID: Rep_556_c_0_143
Type: TC
Location: 218499 - 221915 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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