Genome Details
Selected Rep_genome_ID: Rep_529
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902472605
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_529 | 3,080,501 | 92.9104% | 0.186567% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_529_CGC13 | CGCFAM_00030 | Yes | 4 | 2 | |
| Rep_529_CGC17 | CGCFAM_00273 | Yes | 20 | 16 | xylan |
| Rep_529_CGC22 | CGCFAM_00699 | Yes | 7 | 3 | |
| Rep_529_CGC9 | CGCFAM_00755 | Yes | 6 | 1 | |
| Rep_529_CGC42 | CGCFAM_01113 | Yes | 4 | 1 | |
| Rep_529_CGC31 | CGCFAM_01308 | Yes | 8 | 1 | |
| Rep_529_CGC11 | CGCFAM_01491 | Yes | 14 | 7 | |
| Rep_529_CGC14 | CGCFAM_01658 | Yes | 3 | 1 | |
| Rep_529_CGC3 | CGCFAM_01743 | Yes | 17 | 6 | |
| Rep_529_CGC25 | CGCFAM_02837 | Yes | 4 | 1 | |
| Rep_529_CGC1 | CGCFAM_02862 | Yes | 10 | 1 | |
| Rep_529_CGC54 | CGCFAM_03976 | Yes | 13 | 1 | |
| Rep_529_CGC19 | CGCFAM_04196 | Yes | 12 | 5 | |
| Rep_529_CGC26 | CGCFAM_05941 | Yes | 9 | 1 | |
| Rep_529_CGC23 | CGCFAM_05968 | Yes | 4 | 1 | |
| Rep_529_CGC12 | CGCFAM_06011 | Yes | 5 | 1 | |
| Rep_529_CGC37 | CGCFAM_11298 | Yes | 4 | 1 |
Top CAZyme Families