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Genome Details

Selected Rep_genome_ID: Rep_480
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
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Phylum
Bacteroidota
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Class
Bacteroidia
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Order
Bacteroidales
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Family
Bacteroidaceae
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Genus
Bacteroides
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Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_480 5,182,311 96.8691% 1.23916% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_480_CGC29 CGCFAM_00031 Yes 7 3 pectin/galactan
Rep_480_CGC70 CGCFAM_00033 Yes 7 6
Rep_480_CGC71 CGCFAM_00033 Yes 5 2
Rep_480_CGC47 CGCFAM_00038 Yes 3 2
Rep_480_CGC65 CGCFAM_00044 Yes 21 11 beta-mannan/xylan/beta-glucan
Rep_480_CGC64 CGCFAM_00062 Yes 6 3 beta-glucan
Rep_480_CGC84 CGCFAM_00079 Yes 3 2 pectin
Rep_480_CGC60 CGCFAM_00083 Yes 3 1 beta-glucan
Rep_480_CGC6 CGCFAM_00104 Yes 4 1
Rep_480_CGC81 CGCFAM_00110 Yes 7 3 pectin/host glycan
PUL0533_Rep_480_C2 CGCFAM_00116 Yes 7 2 xylan
Rep_480_CGC76 CGCFAM_00116 Yes 7 2 xylan/beta-glucan
Rep_480_CGC75 CGCFAM_00138 Yes 5 1
Rep_480_CGC33 CGCFAM_00148 Yes 5 2
Rep_480_CGC62 CGCFAM_00170 Yes 13 6
Rep_480_CGC19 CGCFAM_00297 Yes 10 1
Rep_480_CGC5 CGCFAM_00303 Yes 7 2
Rep_480_CGC27 CGCFAM_00361 Yes 4 1
Rep_480_CGC40 CGCFAM_00365 Yes 5 1 host glycan
Rep_480_CGC73 CGCFAM_00372 Yes 12 3
Rep_480_CGC18 CGCFAM_00406 Yes 9 2
Rep_480_CGC37 CGCFAM_00482 Yes 6 1 fructan
Rep_480_CGC72 CGCFAM_00556 Yes 3 1
Rep_480_CGC59 CGCFAM_00567 Yes 5 1
Rep_480_CGC22 CGCFAM_00602 Yes 5 1
Top CAZyme Families