Cluster: PUL0533_Rep_480_C2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: xylan
- Genome ID: Rep_480
- CGC Family ID: CGCFAM_00116
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0533_Rep_480_C2 | Rep_480_c_262_2 | 134 | 1777 | - | GH30_8 |
| CAZyme | PUL0533_Rep_480_C2 | Rep_480_c_262_3 | 1802 | 4015 | - | GH10 |
| pfam | PUL0533_Rep_480_C2 | Rep_480_c_262_4 | 4050 | 5084 | - | BT_3987-like_N | DUF5627 |
| pfam | PUL0533_Rep_480_C2 | Rep_480_c_262_5 | 5122 | 6879 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0533_Rep_480_C2 | Rep_480_c_262_6 | 6908 | 9733 | - | 1.B.14.6.1 |
| pfam | PUL0533_Rep_480_C2 | Rep_480_c_262_7 | 9768 | 11645 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0533_Rep_480_C2 | Rep_480_c_262_8 | 11662 | 14649 | - | 1.B.14.6.1 |
Gene ID: Rep_480_c_262_2
Type: CAZyme
Location: 134 - 1777 (-)
Type: CAZyme
Location: 134 - 1777 (-)
Gene ID: Rep_480_c_262_3
Type: CAZyme
Location: 1802 - 4015 (-)
Type: CAZyme
Location: 1802 - 4015 (-)
Gene ID: Rep_480_c_262_4
Type: pfam
Location: 4050 - 5084 (-)
Type: pfam
Location: 4050 - 5084 (-)
Gene ID: Rep_480_c_262_5
Type: pfam
Location: 5122 - 6879 (-)
Type: pfam
Location: 5122 - 6879 (-)
Gene ID: Rep_480_c_262_6
Type: TC
Location: 6908 - 9733 (-)
Type: TC
Location: 6908 - 9733 (-)
Gene ID: Rep_480_c_262_7
Type: pfam
Location: 9768 - 11645 (-)
Type: pfam
Location: 9768 - 11645 (-)
Gene ID: Rep_480_c_262_8
Type: TC
Location: 11662 - 14649 (-)
Type: TC
Location: 11662 - 14649 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Composition
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