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Cluster: Rep_480_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_480_c_80 Rep_480_c_80_23 24966 26660 - 2.A.21.3.19
sulfatase Rep_480_c_80 Rep_480_c_80_24 26687 27826 - S1_22
CAZyme Rep_480_c_80 Rep_480_c_80_25 27990 29924 - GH43_4
pfam Rep_480_c_80 Rep_480_c_80_26 29938 31758 - SusD_RagB | SusD-like_3
TC Rep_480_c_80 Rep_480_c_80_27 31791 35036 - 1.B.14.6.2
pfam Rep_480_c_80 Rep_480_c_80_28 35057 36802 - SusD_RagB | SusD-like_3
TC Rep_480_c_80 Rep_480_c_80_29 36811 39924 - 1.B.14.6.1
pfam Rep_480_c_80 Rep_480_c_80_30 39952 41820 - Laminin_G_3
pfam Rep_480_c_80 Rep_480_c_80_31 42349 43683 - HlyD_3
TC Rep_480_c_80 Rep_480_c_80_32 43685 45745 - 3.A.1.112.9
Gene ID: Rep_480_c_80_23
Type: TC
Location: 24966 - 26660 (-)
Gene ID: Rep_480_c_80_24
Type: sulfatase
Location: 26687 - 27826 (-)
Gene ID: Rep_480_c_80_25
Type: CAZyme
Location: 27990 - 29924 (-)
Gene ID: Rep_480_c_80_26
Type: pfam
Location: 29938 - 31758 (-)
Gene ID: Rep_480_c_80_27
Type: TC
Location: 31791 - 35036 (-)
Gene ID: Rep_480_c_80_28
Type: pfam
Location: 35057 - 36802 (-)
Gene ID: Rep_480_c_80_29
Type: TC
Location: 36811 - 39924 (-)
Gene ID: Rep_480_c_80_30
Type: pfam
Location: 39952 - 41820 (-)
Gene ID: Rep_480_c_80_31
Type: pfam
Location: 42349 - 43683 (-)
Gene ID: Rep_480_c_80_32
Type: TC
Location: 43685 - 45745 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_480_c_80_25 vegetarian > vegan 2.46060 0.04613

🧭 Explore Read Mapping of CGC

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