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Cluster: Rep_480_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_480_c_79 Rep_480_c_79_14 17242 19092 - GH13_46
pfam Rep_480_c_79 Rep_480_c_79_15 19214 20557 - TPR_8
TC Rep_480_c_79 Rep_480_c_79_16 20743 21903 - 3.B.1.1.2
pfam Rep_480_c_79 Rep_480_c_79_17 21905 22336 - Biotin_lipoyl | Biotin_lipoyl_2
pfam Rep_480_c_79 Rep_480_c_79_18 22362 23294 - LTD | OAD_gamma
TC Rep_480_c_79 Rep_480_c_79_19 23322 24875 - 3.B.1.1.2
STP Rep_480_c_79 Rep_480_c_79_20 25012 25425 - Glyoxalase
pfam Rep_480_c_79 Rep_480_c_79_21 25577 26533 - Phage_integrase | Phage_int_SAM_1
CAZyme Rep_480_c_79 Rep_480_c_79_22 26640 27758 + GT2
Gene ID: Rep_480_c_79_14
Type: CAZyme
Location: 17242 - 19092 (-)
Gene ID: Rep_480_c_79_15
Type: pfam
Location: 19214 - 20557 (-)
Gene ID: Rep_480_c_79_16
Type: TC
Location: 20743 - 21903 (-)
Gene ID: Rep_480_c_79_17
Type: pfam
Location: 21905 - 22336 (-)
Gene ID: Rep_480_c_79_18
Type: pfam
Location: 22362 - 23294 (-)
Gene ID: Rep_480_c_79_19
Type: TC
Location: 23322 - 24875 (-)
Gene ID: Rep_480_c_79_20
Type: STP
Location: 25012 - 25425 (-)
Gene ID: Rep_480_c_79_21
Type: pfam
Location: 25577 - 26533 (-)
Gene ID: Rep_480_c_79_22
Type: CAZyme
Location: 26640 - 27758 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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