Cluster: Rep_480_CGC70
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_480
- CGC Family ID: CGCFAM_00033
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_480_c_236 | Rep_480_c_236_14 | 15698 | 16888 | + | GT2 |
| CAZyme | Rep_480_c_236 | Rep_480_c_236_15 | 16894 | 18015 | + | GT4 |
| CAZyme | Rep_480_c_236 | Rep_480_c_236_16 | 18025 | 19149 | + | GT4 |
| TC | Rep_480_c_236 | Rep_480_c_236_17 | 19166 | 20629 | + | 2.A.66.2.23 |
| CAZyme | Rep_480_c_236 | Rep_480_c_236_18 | 20719 | 21669 | + | GT2 |
| CAZyme | Rep_480_c_236 | Rep_480_c_236_19 | 21674 | 22705 | + | GT113 |
| CAZyme | Rep_480_c_236 | Rep_480_c_236_20 | 22710 | 23849 | + | GT4 |
Gene ID: Rep_480_c_236_14
Type: CAZyme
Location: 15698 - 16888 (+)
Type: CAZyme
Location: 15698 - 16888 (+)
Gene ID: Rep_480_c_236_15
Type: CAZyme
Location: 16894 - 18015 (+)
Type: CAZyme
Location: 16894 - 18015 (+)
Gene ID: Rep_480_c_236_16
Type: CAZyme
Location: 18025 - 19149 (+)
Type: CAZyme
Location: 18025 - 19149 (+)
Gene ID: Rep_480_c_236_17
Type: TC
Location: 19166 - 20629 (+)
Type: TC
Location: 19166 - 20629 (+)
Gene ID: Rep_480_c_236_18
Type: CAZyme
Location: 20719 - 21669 (+)
Type: CAZyme
Location: 20719 - 21669 (+)
Gene ID: Rep_480_c_236_19
Type: CAZyme
Location: 21674 - 22705 (+)
Type: CAZyme
Location: 21674 - 22705 (+)
Gene ID: Rep_480_c_236_20
Type: CAZyme
Location: 22710 - 23849 (+)
Type: CAZyme
Location: 22710 - 23849 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.