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Genome Details

Selected Rep_genome_ID: Rep_479
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
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Phylum
Bacteroidota
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Class
Bacteroidia
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Order
Bacteroidales
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Family
Bacteroidaceae
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Genus
Bacteroides
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Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_479 4,547,723 92.1912% 1.20818% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_479_CGC23 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_479_CGC38 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_479_CGC49 CGCFAM_00016 Yes 7 3 host glycan
Rep_479_CGC4 CGCFAM_00017 Yes 6 3 fructan
Rep_479_CGC62 CGCFAM_00023 Yes 3 1
Rep_479_CGC3 CGCFAM_00025 Yes 7 2 pectin/alpha-glucan
Rep_479_CGC32 CGCFAM_00083 Yes 5 2 beta-glucan
Rep_479_CGC18 CGCFAM_00109 Yes 10 4 host glycan
Rep_479_CGC26 CGCFAM_00118 Yes 6 2
Rep_479_CGC22 CGCFAM_00148 Yes 8 6
Rep_479_CGC58 CGCFAM_00170 Yes 8 4
Rep_479_CGC52 CGCFAM_00239 Yes 11 6 xylan
Rep_479_CGC11 CGCFAM_00273 Yes 16 11 xylan
Rep_479_CGC64 CGCFAM_00275 Yes 5 3
Rep_479_CGC54 CGCFAM_00297 Yes 8 1
Rep_479_CGC13 CGCFAM_00298 Yes 20 8 pectin
Rep_479_CGC56 CGCFAM_00361 Yes 5 2
Rep_479_CGC25 CGCFAM_00406 Yes 6 1
Rep_479_CGC8 CGCFAM_00525 Yes 5 2
Rep_479_CGC21 CGCFAM_00567 Yes 6 2
Rep_479_CGC20 CGCFAM_00577 Yes 12 6 beta-mannan/beta-glucan
Rep_479_CGC65 CGCFAM_00584 Yes 6 2
Rep_479_CGC45 CGCFAM_00740 Yes 7 4
Rep_479_CGC55 CGCFAM_00925 Yes 4 1 beta-glucan
Rep_479_CGC63 CGCFAM_01055 Yes 11 5
Top CAZyme Families