Cluster: Rep_479_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_479
- CGC Family ID: CGCFAM_00567
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_479_c_128 | Rep_479_c_128_43 | 50225 | 53518 | + | 1.B.14.6.1 |
| TC | Rep_479_c_128 | Rep_479_c_128_44 | 53554 | 55221 | + | 8.A.46.1.5 |
| CAZyme | Rep_479_c_128 | Rep_479_c_128_45 | 55247 | 56074 | + | CBM32 |
| NULL(UNKNOWN) | Rep_479_c_128 | Rep_479_c_128_46 | 56238 | 56888 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_479_c_128 | Rep_479_c_128_47 | 57231 | 58247 | + | HTH_11 |
| CAZyme | Rep_479_c_128 | Rep_479_c_128_48 | 58279 | 62139 | + | GH31_18 |
Gene ID: Rep_479_c_128_43
Type: TC
Location: 50225 - 53518 (+)
Type: TC
Location: 50225 - 53518 (+)
Gene ID: Rep_479_c_128_44
Type: TC
Location: 53554 - 55221 (+)
Type: TC
Location: 53554 - 55221 (+)
Gene ID: Rep_479_c_128_45
Type: CAZyme
Location: 55247 - 56074 (+)
Type: CAZyme
Location: 55247 - 56074 (+)
Gene ID: Rep_479_c_128_46
Type:
Location: 56238 - 56888 (+)
Type:
Location: 56238 - 56888 (+)
Gene ID: Rep_479_c_128_47
Type: TF
Location: 57231 - 58247 (+)
Type: TF
Location: 57231 - 58247 (+)
Gene ID: Rep_479_c_128_48
Type: CAZyme
Location: 58279 - 62139 (+)
Type: CAZyme
Location: 58279 - 62139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.