Cluster: Rep_479_CGC58
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_479
- CGC Family ID: CGCFAM_00170
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_479_c_371 | Rep_479_c_371_3 | 1929 | 2753 | + | GT5 |
| pfam | Rep_479_c_371 | Rep_479_c_371_4 | 2778 | 4304 | + | DUF4270 |
| TC | Rep_479_c_371 | Rep_479_c_371_5 | 4495 | 6579 | + | 9.B.33.1.1 |
| TF | Rep_479_c_371 | Rep_479_c_371_6 | 6712 | 7464 | + | LytTR |
| CAZyme | Rep_479_c_371 | Rep_479_c_371_7 | 7590 | 8975 | - | GH57 |
| CAZyme | Rep_479_c_371 | Rep_479_c_371_8 | 8993 | 10261 | - | GT4 |
| CAZyme | Rep_479_c_371 | Rep_479_c_371_9 | 10277 | 12220 | - | GH133 |
| TC | Rep_479_c_371 | Rep_479_c_371_10 | 12407 | 13084 | + | 9.B.104.3.2 |
Gene ID: Rep_479_c_371_3
Type: CAZyme
Location: 1929 - 2753 (+)
Type: CAZyme
Location: 1929 - 2753 (+)
Gene ID: Rep_479_c_371_4
Type: pfam
Location: 2778 - 4304 (+)
Type: pfam
Location: 2778 - 4304 (+)
Gene ID: Rep_479_c_371_5
Type: TC
Location: 4495 - 6579 (+)
Type: TC
Location: 4495 - 6579 (+)
Gene ID: Rep_479_c_371_6
Type: TF
Location: 6712 - 7464 (+)
Type: TF
Location: 6712 - 7464 (+)
Gene ID: Rep_479_c_371_7
Type: CAZyme
Location: 7590 - 8975 (-)
Type: CAZyme
Location: 7590 - 8975 (-)
Gene ID: Rep_479_c_371_8
Type: CAZyme
Location: 8993 - 10261 (-)
Type: CAZyme
Location: 8993 - 10261 (-)
Gene ID: Rep_479_c_371_9
Type: CAZyme
Location: 10277 - 12220 (-)
Type: CAZyme
Location: 10277 - 12220 (-)
Gene ID: Rep_479_c_371_10
Type: TC
Location: 12407 - 13084 (+)
Type: TC
Location: 12407 - 13084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.