dbCAN Logo

Cluster: Rep_479_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_479_c_325 Rep_479_c_325_3 4546 7662 + 1.B.14.6.1
pfam Rep_479_c_325 Rep_479_c_325_4 7671 9428 + SusD_RagB | SusD-like_3
TC Rep_479_c_325 Rep_479_c_325_5 9450 12692 + 1.B.14.6.2
pfam Rep_479_c_325 Rep_479_c_325_6 12717 14546 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) Rep_479_c_325 Rep_479_c_325_7 14606 15043 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_479_c_325 Rep_479_c_325_8 15146 17062 + GH43_4
sulfatase Rep_479_c_325 Rep_479_c_325_9 17229 18368 + S1_22
TC Rep_479_c_325 Rep_479_c_325_10 18391 20085 + 2.A.21.3.19
Gene ID: Rep_479_c_325_3
Type: TC
Location: 4546 - 7662 (+)
Gene ID: Rep_479_c_325_4
Type: pfam
Location: 7671 - 9428 (+)
Gene ID: Rep_479_c_325_5
Type: TC
Location: 9450 - 12692 (+)
Gene ID: Rep_479_c_325_6
Type: pfam
Location: 12717 - 14546 (+)
Gene ID: Rep_479_c_325_7
Type:
Location: 14606 - 15043 (+)
Gene ID: Rep_479_c_325_8
Type: CAZyme
Location: 15146 - 17062 (+)
Gene ID: Rep_479_c_325_9
Type: sulfatase
Location: 17229 - 18368 (+)
Gene ID: Rep_479_c_325_10
Type: TC
Location: 18391 - 20085 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List