Genome Details
Selected Rep_genome_ID: Rep_443
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella clara
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG003_bin.13 | 3,623,089 | 98.66% | 0.02% | NA | Africa | H3AfricaPhase2 |
| CGMR086260 | 3,706,404 | 99.26% | 0% | China | Asia | CGMR |
| Rep_443 | 3,998,796 | 99.2565% | 0% | NA | NA | WIS |
| SPMP39_bin.120 | 3,829,596 | 99.26% | 0.37% | Singapore | Asia | SPMP |
| SPMP45_bin.136 | 4,003,011 | 97.34% | 1.31% | Singapore | Asia | SPMP |
| SPMP48_bin.125 | 3,756,561 | 93.56% | 0.56% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_443_CGC17 | CGCFAM_00001 | Yes | 6 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_443_CGC5 | CGCFAM_00341 | Yes | 4 | 1 | |
| Rep_443_CGC23 | CGCFAM_00699 | Yes | 5 | 1 | |
| Rep_443_CGC36 | CGCFAM_00721 | Yes | 3 | 1 | |
| Rep_443_CGC2 | CGCFAM_01034 | Yes | 12 | 2 | |
| Rep_443_CGC41 | CGCFAM_01611 | Yes | 3 | 1 | |
| Rep_443_CGC45 | CGCFAM_02081 | Yes | 8 | 4 | |
| Rep_443_CGC39 | CGCFAM_02610 | Yes | 4 | 1 | |
| Rep_443_CGC52 | CGCFAM_03432 | Yes | 7 | 4 | |
| Rep_443_CGC29 | CGCFAM_04935 | Yes | 11 | 7 | |
| Rep_443_CGC24 | CGCFAM_04937 | Yes | 11 | 3 | |
| Rep_443_CGC20 | CGCFAM_04938 | Yes | 3 | 1 | |
| Rep_443_CGC6 | CGCFAM_04939 | Yes | 4 | 1 | |
| Rep_443_CGC50 | CGCFAM_04940 | Yes | 7 | 3 | |
| Rep_443_CGC32 | CGCFAM_07479 | Yes | 16 | 6 | |
| Rep_443_CGC44 | CGCFAM_07481 | Yes | 6 | 4 | |
| Rep_443_CGC10 | CGCFAM_07483 | Yes | 7 | 5 | |
| Rep_443_CGC7 | CGCFAM_07484 | Yes | 10 | 3 | |
| Rep_443_CGC3 | CGCFAM_07485 | Yes | 4 | 2 | |
| Rep_443_CGC47 | CGCFAM_07487 | Yes | 4 | 1 | |
| Rep_443_CGC37 | CGCFAM_07488 | Yes | 3 | 1 | |
| Rep_443_CGC33 | CGCFAM_07489 | Yes | 12 | 5 | |
| Rep_443_CGC25 | CGCFAM_07966 | Yes | 3 | 1 |
Top CAZyme Families