Cluster: Rep_443_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_443
- CGC Family ID: CGCFAM_07487
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_443_c_0 | Rep_443_c_0_2845 | 3659375 | 3660886 | + | GH30_2 |
| NULL(UNKNOWN) | Rep_443_c_0 | Rep_443_c_0_2846 | 3661095 | 3661535 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_443_c_0 | Rep_443_c_0_2847 | 3661823 | 3662692 | - | 3.A.2.1.5 |
| TC | Rep_443_c_0 | Rep_443_c_0_2848 | 3662699 | 3664285 | - | 3.A.2.1.3 |
Gene ID: Rep_443_c_0_2845
Type: CAZyme
Location: 3659375 - 3660886 (+)
Type: CAZyme
Location: 3659375 - 3660886 (+)
Gene ID: Rep_443_c_0_2846
Type:
Location: 3661095 - 3661535 (+)
Type:
Location: 3661095 - 3661535 (+)
Gene ID: Rep_443_c_0_2847
Type: TC
Location: 3661823 - 3662692 (-)
Type: TC
Location: 3661823 - 3662692 (-)
Gene ID: Rep_443_c_0_2848
Type: TC
Location: 3662699 - 3664285 (-)
Type: TC
Location: 3662699 - 3664285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella clara
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_443_c_0_2845 | vegan > omnivore | 1.03202 | 0.00498 |
| Rep_443_c_0_2846 | vegan > omnivore | 1.50854 | 0.00498 |
| Rep_443_c_0_2846 | vegetarian > omnivore | 1.13590 | 0.00565 |