Genome Details
Selected Rep_genome_ID: Rep_411
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Species
Duncaniella sp900549445
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0494 | 2,812,162 | 96.09% | 0.388% | United Republic of Tanzania | Africa | HRGM |
| MGYG000001640 | 2,860,567 | 97.68% | 1.13% | United States | North America | UHGG |
| Rep_411 | 3,182,495 | 98.5535% | 0.125786% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_411_CGC22 | CGCFAM_00028 | Yes | 4 | 3 | |
| Rep_411_CGC19 | CGCFAM_00031 | Yes | 9 | 3 | pectin/galactan |
| Rep_411_CGC23 | CGCFAM_00044 | Yes | 9 | 4 | beta-mannan/xylan/beta-glucan |
| Rep_411_CGC13 | CGCFAM_00108 | Yes | 10 | 4 | pectin |
| Rep_411_CGC18 | CGCFAM_00118 | Yes | 10 | 5 | |
| Rep_411_CGC28 | CGCFAM_00120 | Yes | 3 | 1 | |
| Rep_411_CGC21 | CGCFAM_00225 | Yes | 7 | 4 | arabinogalactan |
| Rep_411_CGC31 | CGCFAM_00238 | Yes | 12 | 7 | xylan |
| Rep_411_CGC3 | CGCFAM_00478 | Yes | 5 | 2 | |
| Rep_411_CGC16 | CGCFAM_01228 | Yes | 4 | 2 | |
| Rep_411_CGC33 | CGCFAM_02909 | Yes | 6 | 1 | |
| Rep_411_CGC25 | CGCFAM_03926 | Yes | 9 | 3 | |
| Rep_411_CGC5 | CGCFAM_06345 | Yes | 7 | 1 | |
| Rep_411_CGC17 | CGCFAM_10938 | Yes | 5 | 1 | |
| Rep_411_CGC4 | CGCFAM_11285 | Yes | 8 | 4 |
Top CAZyme Families