Cluster: Rep_411_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_411
- CGC Family ID: CGCFAM_00478
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_411_c_19 | Rep_411_c_19_2 | 1021 | 2679 | + | GT3 |
| CAZyme | Rep_411_c_19 | Rep_411_c_19_3 | 2922 | 5483 | + | GT35 |
| TF | Rep_411_c_19 | Rep_411_c_19_4 | 5640 | 8435 | + | HTH_AraC |
| STP | Rep_411_c_19 | Rep_411_c_19_5 | 8682 | 9197 | + | Sigma70_r2 | Sigma70_r4_2 |
| TC | Rep_411_c_19 | Rep_411_c_19_6 | 9261 | 9749 | + | 1.B.14.6.1 |
Gene ID: Rep_411_c_19_2
Type: CAZyme
Location: 1021 - 2679 (+)
Type: CAZyme
Location: 1021 - 2679 (+)
Gene ID: Rep_411_c_19_3
Type: CAZyme
Location: 2922 - 5483 (+)
Type: CAZyme
Location: 2922 - 5483 (+)
Gene ID: Rep_411_c_19_4
Type: TF
Location: 5640 - 8435 (+)
Type: TF
Location: 5640 - 8435 (+)
Gene ID: Rep_411_c_19_5
Type: STP
Location: 8682 - 9197 (+)
Type: STP
Location: 8682 - 9197 (+)
Gene ID: Rep_411_c_19_6
Type: TC
Location: 9261 - 9749 (+)
Type: TC
Location: 9261 - 9749 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Duncaniella
Species
Duncaniella sp900549445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.