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Cluster: Rep_411_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_411_c_20 Rep_411_c_20_27 27846 28661 - GT5
TC Rep_411_c_20 Rep_411_c_20_28 28854 30155 - 3.D.5.1.1
TC Rep_411_c_20 Rep_411_c_20_29 30161 30778 - 3.D.5.1.1
TC Rep_411_c_20 Rep_411_c_20_30 30804 31430 - 3.D.5.1.1
TC Rep_411_c_20 Rep_411_c_20_31 31464 32177 - 3.D.5.1.1
TC Rep_411_c_20 Rep_411_c_20_32 32194 33402 - 3.D.5.1.1
TC Rep_411_c_20 Rep_411_c_20_33 33437 34801 - 3.D.5.1.1
Gene ID: Rep_411_c_20_27
Type: CAZyme
Location: 27846 - 28661 (-)
Gene ID: Rep_411_c_20_28
Type: TC
Location: 28854 - 30155 (-)
Gene ID: Rep_411_c_20_29
Type: TC
Location: 30161 - 30778 (-)
Gene ID: Rep_411_c_20_30
Type: TC
Location: 30804 - 31430 (-)
Gene ID: Rep_411_c_20_31
Type: TC
Location: 31464 - 32177 (-)
Gene ID: Rep_411_c_20_32
Type: TC
Location: 32194 - 33402 (-)
Gene ID: Rep_411_c_20_33
Type: TC
Location: 33437 - 34801 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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