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Cluster: Rep_411_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_411_c_117 Rep_411_c_117_11 8355 9452 - GH10
CAZyme Rep_411_c_117 Rep_411_c_117_12 9466 12192 - CE6 | GH97
CAZyme Rep_411_c_117 Rep_411_c_117_13 12189 13529 - CBM6 | GH43_29
CAZyme Rep_411_c_117 Rep_411_c_117_14 13556 14704 - CE1
CAZyme Rep_411_c_117 Rep_411_c_117_15 14832 16991 - GH10
pfam Rep_411_c_117 Rep_411_c_117_16 17004 18050 - BT_3987-like_N | DUF5627
pfam Rep_411_c_117 Rep_411_c_117_17 18084 19868 - SusD_RagB | SusD-like_3
TC Rep_411_c_117 Rep_411_c_117_18 19884 22712 - 1.B.14.6.1
pfam Rep_411_c_117 Rep_411_c_117_19 22751 24685 - SusD_RagB | SusD-like_3
TC Rep_411_c_117 Rep_411_c_117_20 24701 27862 - 1.B.14.6.1
CAZyme Rep_411_c_117 Rep_411_c_117_21 27903 29624 - CBM91 | GH43_12
CAZyme Rep_411_c_117 Rep_411_c_117_22 29963 31543 - CBM91 | GH43_10
Gene ID: Rep_411_c_117_11
Type: CAZyme
Location: 8355 - 9452 (-)
Gene ID: Rep_411_c_117_12
Type: CAZyme
Location: 9466 - 12192 (-)
Gene ID: Rep_411_c_117_13
Type: CAZyme
Location: 12189 - 13529 (-)
Gene ID: Rep_411_c_117_14
Type: CAZyme
Location: 13556 - 14704 (-)
Gene ID: Rep_411_c_117_15
Type: CAZyme
Location: 14832 - 16991 (-)
Gene ID: Rep_411_c_117_16
Type: pfam
Location: 17004 - 18050 (-)
Gene ID: Rep_411_c_117_17
Type: pfam
Location: 18084 - 19868 (-)
Gene ID: Rep_411_c_117_18
Type: TC
Location: 19884 - 22712 (-)
Gene ID: Rep_411_c_117_19
Type: pfam
Location: 22751 - 24685 (-)
Gene ID: Rep_411_c_117_20
Type: TC
Location: 24701 - 27862 (-)
Gene ID: Rep_411_c_117_21
Type: CAZyme
Location: 27903 - 29624 (-)
Gene ID: Rep_411_c_117_22
Type: CAZyme
Location: 29963 - 31543 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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