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Genome Details

Selected Rep_genome_ID: Rep_223
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
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Phylum
Bacteroidota
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Class
Bacteroidia
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Order
Bacteroidales
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Family
Bacteroidaceae
→
Genus
Prevotella
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Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_223 3,701,800 96.3633% 3.36149% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_223_CGC19 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_223_CGC46 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_223_CGC58 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_223_CGC57 CGCFAM_00017 Yes 9 3 fructan
Rep_223_CGC10 CGCFAM_00032 Yes 5 2
Rep_223_CGC49 CGCFAM_00044 Yes 11 5 beta-mannan/xylan/beta-glucan
Rep_223_CGC45 CGCFAM_00059 Yes 4 1
Rep_223_CGC14 CGCFAM_00062 Yes 6 1 beta-glucan
Rep_223_CGC44 CGCFAM_00095 Yes 8 3
Rep_223_CGC38 CGCFAM_00109 Yes 8 5 host glycan
Rep_223_CGC27 CGCFAM_00136 Yes 5 2 pectin
Rep_223_CGC63 CGCFAM_00173 Yes 7 1
Rep_223_CGC1 CGCFAM_00181 Yes 9 1
Rep_223_CGC40 CGCFAM_00225 Yes 5 3 arabinogalactan
Rep_223_CGC8 CGCFAM_00320 Yes 6 1
Rep_223_CGC35 CGCFAM_00474 Yes 6 1
Rep_223_CGC23 CGCFAM_00655 Yes 4 2
Rep_223_CGC53 CGCFAM_00724 Yes 3 1 xylan
Rep_223_CGC4 CGCFAM_00777 Yes 4 2
Rep_223_CGC6 CGCFAM_01072 Yes 5 1
Rep_223_CGC56 CGCFAM_01077 Yes 14 6
Rep_223_CGC48 CGCFAM_01143 Yes 10 4
Rep_223_CGC30 CGCFAM_01603 Yes 8 1
Rep_223_CGC26 CGCFAM_02235 Yes 6 1
Rep_223_CGC50 CGCFAM_02241 Yes 8 5
Top CAZyme Families