dbCAN Logo

Cluster: Rep_223_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_223_c_294 Rep_223_c_294_14 13151 14065 + 3.D.6.1.3
TC Rep_223_c_294 Rep_223_c_294_15 14062 15417 + 3.D.6.1.2
TC Rep_223_c_294 Rep_223_c_294_16 15421 16419 + 3.D.6.1.2
TC Rep_223_c_294 Rep_223_c_294_17 16465 17067 + 3.D.6.1.2
TC Rep_223_c_294 Rep_223_c_294_18 17074 17658 + 3.D.6.1.2
TC Rep_223_c_294 Rep_223_c_294_19 17680 18282 + 3.D.6.1.2
CAZyme Rep_223_c_294 Rep_223_c_294_20 18382 19689 + CE7
Gene ID: Rep_223_c_294_14
Type: TC
Location: 13151 - 14065 (+)
Gene ID: Rep_223_c_294_15
Type: TC
Location: 14062 - 15417 (+)
Gene ID: Rep_223_c_294_16
Type: TC
Location: 15421 - 16419 (+)
Gene ID: Rep_223_c_294_17
Type: TC
Location: 16465 - 17067 (+)
Gene ID: Rep_223_c_294_18
Type: TC
Location: 17074 - 17658 (+)
Gene ID: Rep_223_c_294_19
Type: TC
Location: 17680 - 18282 (+)
Gene ID: Rep_223_c_294_20
Type: CAZyme
Location: 18382 - 19689 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_223_c_294_15 vegetarian > vegan 1.10351 0.01287

🧭 Explore Read Mapping of CGC

← Back to Cluster List